RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ARMC6Q6NXE6 501 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 METTL2BQ6P1Q9 378 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 C8orf82Q6P1X6 216 aaPredicted RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TTC23LQ6PF05 361 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 XKR5Q6UX68 686 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TAS2R42Q7RTR8 314 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 PRSS42Q7Z5A4 293 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 OOSP2Q86WS3 158 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ZFAND4Q86XD8 727 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 DTX1Q86Y01 620 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ERI1Q8IV48 349 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TBC1D21Q8IYX1 336 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 IL22RA1Q8N6P7 574 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TSPAN14Q8NG11 270 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 OR4L1Q8NH43 312 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 DNAJB8Q8NHS0 232 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 HDAC10Q969S8 669 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 KIAA1191Q96A73 305 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 PPWD1Q96BP3 646 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 C19orf60Q96EN9 201 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 CDKN2AIPNLQ96HQ2 116 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 C12orf66Q96MD2 445 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TGM7Q96PF1 710 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 NPAS2Q99743 824 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 PKP2Q99959 881 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TRIT1Q9H3H1 467 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF768Q9H5H4 540 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 CATSPERZQ9NTU4 200 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 IMP3Q9NV31 184 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 OCIAD1Q9NX40 245 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ETAA1Q9NY74 926 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 CCDC167Q9P0B6 97 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 G3BP2Q9UN86 482 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 KCTD3Q9Y597 815 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TNPO3Q9Y5L0 923 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 B3GALT1Q9Y5Z6 326 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 SPTA1P02549 2419 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TLN1Q9Y490 2541 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 IGLV3-16A0A075B6K0 115 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 TRBV5-4A0A0C4DH59 114 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 E7ENX8 843 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 RAD1O60671 282 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 KERAO60938 352 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 KATNA1O75449 491 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 NDUFS3O75489 264 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 AP2A2O94973 939 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 UROSP10746 265 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 CD1DP15813 335 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 GPX3P22352 226 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 MAP4P27816 1152 aaKnown RBP9.98□□□□□ -0.81
COL5A1-202ENST00000371820 TTPAP49638 278 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 PKNOX1P55347 436 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 GFERP55789 205 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 KCNK10P57789 538 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 EPS8Q12929 822 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 NFATC3Q12968 1075 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 RPA4Q13156 261 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 UNC50Q53HI1 259 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 CACHD1Q5VU97 1274 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 FOXB2Q5VYV0 432 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 LCN8Q6JVE9 175 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 AFTPHQ6ULP2 937 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 VASH2Q86V25 355 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 SERPINA9Q86WD7 417 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 KMT5CQ86Y97 462 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 CFAP206Q8IYR0 622 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 FAM9CQ8IZT9 166 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 CARFQ8N187 725 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 BMPERQ8N8U9 685 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 ACVR1CQ8NER5 493 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 TRPV3Q8NET8 790 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 ADAMTS16Q8TE57 1224 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 EXTL1Q92935 676 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 ATP6V1E2Q96A05 226 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 KIAA1143Q96AT1 154 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-202ENST00000371820 CENPNQ96H22 339 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-202ENST00000371820 CNBD2Q96M20 576 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 NDNQ99608 321 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 GPATCH1Q9BRR8 931 aaKnown RBP9.98□□□□□ -0.81
COL5A1-202ENST00000371820 AARSD1Q9BTE6 412 aaKnown RBP9.98□□□□□ -0.81
COL5A1-202ENST00000371820 ANKRD60Q9BZ19 345 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 CLMPQ9H6B4 373 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 ZIM2Q9NZV7 527 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 ABCD2Q9UBJ2 740 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 FAM8A1Q9UBU6 413 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 LEF1Q9UJU2 399 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-202ENST00000371820 WDR37Q9Y2I8 494 aa9.98□□□□□ -0.81
COL5A1-202ENST00000371820 BOD1L1Q8NFC6 3051 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 SDK2Q58EX2 2172 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 A0A1W2PP18 115 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 CCDC160A6NGH7 325 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 H3BNH8 94 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 KDM1AO60341 852 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 VPS26AO75436 327 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 WISP1O95388 367 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 FTH1P02794 183 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 OR56A5P0C7T3 313 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 GFAPP14136 432 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 WT1P19544 449 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms