RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ASB12Q8WXK4 309 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 NSL1Q96IY1 281 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 MRGPRX1Q96LB2 322 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 FOXB1Q99853 325 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 ADI1Q9BV57 179 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CCDC106Q9BWC9 280 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 TEX101Q9BY14 249 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 DPEP2Q9H4A9 486 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 WDR26Q9H7D7 661 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 ARL15Q9NXU5 204 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 NOP53Q9NZM5 478 aaKnown RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 ATXN10Q9UBB4 475 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 OPTCQ9UBM4 332 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 PDE10AQ9Y233 779 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 FIS1Q9Y3D6 152 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 ANKRD11Q6UB99 2663 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 E9PBE3 544 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 H3BUI4 141 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 K7EPI3 171 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 SDHDO14521 159 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CHUKO15111 745 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 SLC16A6O15403 523 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 KLHL41O60662 606 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 VPS4BO75351 444 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 PSIP1O75475 530 aaKnown RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 CBX6O95503 412 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ENO1P06733 434 aaKnown RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 FTH1P19P0C7X4 201 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 UROSP10746 265 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 NCF2P19878 526 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 EPHA3P29320 983 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TRIM23P36406 574 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 IRX1P78414 480 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 GTF2H2Q13888 395 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 NUMA1Q14980 2115 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 IRF4Q15306 451 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 LSM12Q3MHD2 195 aaKnown RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 ZNF658BQ4V348 819 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 THEMIS2Q5TEJ8 643 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CLEC6AQ6EIG7 209 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 GTF2H2CQ6P1K8 395 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 GPRIN3Q6ZVF9 776 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 LRRC70Q7Z2Q7 622 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 GOLGA7Q7Z5G4 137 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TRIM74Q86UV6 250 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 VRK3Q8IV63 474 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TP53I13Q8NBR0 393 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 PLA2G15Q8NCC3 412 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 OR2L2Q8NH16 312 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TWIST2Q8WVJ9 160 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 RAB24Q969Q5 203 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 KLHL29Q96CT2 875 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 C19orf60Q96EN9 201 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 LENG8Q96PV6 779 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 OR52B2Q96RD2 323 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TMEM79Q9BSE2 394 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 SLC17A9Q9BYT1 436 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 LRMDAQ9H2I8 198 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ZBTB26Q9HCK0 441 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 PHPT1Q9NRX4 125 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 ARMCX1Q9P291 453 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3DA0A087WVF3 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3IA0A087WXS9 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3EA0A087X179 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3KA0A087X1G2 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 A0A1W2PPL8 197 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3FA6NER0 549 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 MGAT4DA6NG13 374 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TMEM202A6NGA9 273 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3LB9A6J9 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 H0YHG0 523 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CCNT2O60583 730 aaKnown RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 STK16O75716 305 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CNOT4O95628 575 aaKnown RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 JUNP05412 331 aaKnown RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3HP0C7X1 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 T-ENOLP0DO92 83 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ZNF8P17098 575 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 ENGP17813 658 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TSPAN8P19075 237 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 PBLDP30039 288 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 PRDX6P30041 224 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 MNAT1P51948 309 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CCNG1P51959 295 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ROM1Q03395 351 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 RPA4Q13156 261 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 UGT3A2Q3SY77 523 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3GQ6DHY5 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3CQ6IPX1 549 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ASRGL1Q7L266 308 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 LRRTM4Q86VH4 590 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 TBC1D3Q8IZP1 549 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 SVOPQ8N4V2 548 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 FBXO15Q8NCQ5 510 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 DENND6BQ8NEG7 585 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 ATL1Q8WXF7 558 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 CMTM5Q96DZ9 223 aa8.44□□□□□ -1.06
TPM3-213ENST00000368545 PTCD3Q96EY7 689 aaKnown RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 PRR11Q96HE9 360 aaPredicted RBP8.44□□□□□ -1.06
TPM3-213ENST00000368545 WDR55Q9H6Y2 383 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms