RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 INAVAQ3KP66 663 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 FAM174BQ3ZCQ3 159 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 LYSMD4Q5XG99 296 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 RAP1GAP2Q684P5 730 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 SCIMPQ6UWF3 145 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 CHST9Q7L1S5 443 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 TRMT11Q7Z4G4 463 aaKnown RBP11.12□□□□□ -0.63
USF1-201ENST00000368019 SPNS2Q8IVW8 549 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 SIDT2Q8NBJ9 832 aaKnown RBP11.12□□□□□ -0.63
USF1-201ENST00000368019 CHTF18Q8WVB6 975 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 EEF1AKMT1Q8WVE0 214 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 SGCDQ92629 289 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
USF1-201ENST00000368019 SCNM1Q9BWG6 230 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 ADGRE3Q9BY15 652 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 LRTM1Q9HBL6 345 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 CAPN10Q9HC96 672 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 IL1RAPQ9NPH3 570 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 LATS2Q9NRM7 1088 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 MARK1Q9P0L2 795 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 MARCH2Q9P0N8 246 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 KLHL3Q9UH77 587 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 ZMIZ1Q9ULJ6 1067 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 SLC6A14Q9UN76 642 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 MAPRE3Q9UPY8 281 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 PCDHB14Q9Y5E9 798 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 PMF1-BGLAPU3KQ54 211 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 FREM2Q5SZK8 3169 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 CKAP5Q14008 2032 aa11.12□□□□□ -0.63
USF1-201ENST00000368019 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 CABIN1Q9Y6J0 2220 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 IGHV1OR15-9A0A0B4J2B8 117 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 A8MVJ9 347 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PRRT4C9JH25 899 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 STX7O15400 261 aaKnown RBP11.11□□□□□ -0.63
USF1-201ENST00000368019 SERPINA1P01009 418 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PRLP01236 227 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 KRT6AP02538 564 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 MT-ND2P03891 347 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 KRT6BP04259 564 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 CISD3P0C7P0 127 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 IRF1P10914 325 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 HOXB2P14652 356 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 DGKAP23743 735 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 ACVRL1P37023 503 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 MAPK8P45983 427 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 KRT6CP48668 564 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 CLK3P49761 638 aaKnown RBP11.11□□□□□ -0.63
USF1-201ENST00000368019 ITGA1P56199 1179 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 C21orf58P58505 322 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 RPS14P62263 151 aaKnown RBP11.11□□□□□ -0.63
USF1-201ENST00000368019 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.11□□□□□ -0.63
USF1-201ENST00000368019 ELP6Q0PNE2 266 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 EFEMP1Q12805 493 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 ABRAXAS2Q15018 415 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 KCNJ8Q15842 424 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 ZNF404Q494X3 552 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PAGE2BQ5JRK9 111 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 SPANXN4Q5MJ08 99 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PERM1Q5SV97 790 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 LDLRAP1Q5SW96 308 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 KIAA1211LQ6NV74 962 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PNCKQ6P2M8 343 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 FAHD1Q6P587 224 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 SLC36A4Q6YBV0 504 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 ZNF783Q6ZMS7 281 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 USP43Q70EL4 1123 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 BTLAQ7Z6A9 289 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 TMEM179BQ7Z7N9 219 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 SLC22A16Q86VW1 577 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PLD3Q8IV08 490 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 ZDHHC21Q8IVQ6 265 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PNPLA1Q8N8W4 532 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 KBTBD8Q8NFY9 601 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 MCFD2Q8NI22 146 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 CEP76Q8TAP6 659 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 NDNFQ8TB73 568 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 NCLNQ969V3 563 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 LGALS12Q96DT0 336 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 OR52E6Q96RD3 313 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 GABRG3Q99928 467 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 GABARAPL3Q9BY60 117 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 CD244Q9BZW8 370 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 CCDC90BQ9GZT6 254 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 TNKS2Q9H2K2 1166 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PIF1Q9H611 641 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 IPPKQ9H8X2 491 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 ERVK-18Q9QC07 812 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 FBXO10Q9UK96 956 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 RALYQ9UKM9 306 aaKnown RBP11.11□□□□□ -0.63
USF1-201ENST00000368019 PKP3Q9Y446 797 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 ASB1Q9Y576 335 aa11.11□□□□□ -0.63
USF1-201ENST00000368019 PLXNB3Q9ULL4 1909 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 ITPR1Q14643 2758 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 PNMA8CA0A1B0GUJ8 204 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 ILVBLA1L0T0 632 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms