RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 LRRC70Q7Z2Q7 622 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 VN1R5Q7Z5H4 357 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 MYLK4Q86YV6 388 aaPredicted RBP13.88□□□□□ -0.19
SF3B5-201ENST00000367569 RNF175Q8N4F7 328 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 TEX9Q8N6V9 391 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 PTGR2Q8N8N7 351 aaPredicted RBP13.88□□□□□ -0.19
SF3B5-201ENST00000367569 OR2W6PQ8NHA6 318 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 UBTD2Q8WUN7 234 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 ISL2Q96A47 359 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 ZBTB9Q96C00 473 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 PSMG3-AS1Q96PY0 264 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 CD244Q9BZW8 370 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 WDR54Q9H977 334 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 ANKHQ9HCJ1 492 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 ENAMQ9NRM1 1142 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 ZFP69BQ9UJL9 534 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 C3orf18Q9UK00 162 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 HS3ST3B1Q9Y662 390 aa13.88□□□□□ -0.19
SF3B5-201ENST00000367569 TXNDC9O14530 226 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 SOCS6O14544 535 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 CEACAM4O75871 244 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 SNRPAP09012 282 aaKnown RBP13.87□□□□□ -0.19
SF3B5-201ENST00000367569 PCNAP12004 261 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 GP1BBP13224 206 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 HNRNPH1P31943 449 aaKnown RBP13.87□□□□□ -0.19
SF3B5-201ENST00000367569 GGT5P36269 586 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 SLC26A3P40879 764 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 XCR1P46094 333 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 RELAQ04206 551 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 RGS1Q08116 209 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 HYAL2Q12891 473 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 DDX39BQ13838 428 aaKnown RBP13.87□□□□□ -0.19
SF3B5-201ENST00000367569 SETDB1Q15047 1291 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 MINDY4Q4G0A6 757 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 ATG9BQ674R7 924 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 TBC1D19Q8N5T2 526 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 CPT1CQ8TCG5 803 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 PHF21BQ96EK2 531 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 PEX11GQ96HA9 241 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 NUDT9Q9BW91 350 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 SLC26A1Q9H2B4 701 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 RHBGQ9H310 441 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 PSMC3IPQ9P2W1 217 aaPredicted RBP13.87□□□□□ -0.19
SF3B5-201ENST00000367569 CDC14AQ9UNH5 594 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 DOCK10Q96BY6 2186 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 ESPL1Q14674 2120 aa13.87□□□□□ -0.19
SF3B5-201ENST00000367569 BLACEA4D250 179 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 VSTM2BA6NLU5 285 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 SYCE1LA8MT33 242 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 IDSB3KWA1 339 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 K7EPI3 171 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 PEX12O00623 359 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 MAP2K7O14733 419 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 SORBS2O94875 1100 aaKnown RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 NSA2O95478 260 aaKnown RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 ONECUT2O95948 504 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 CELA2AP08217 269 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 GNLYP22749 145 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 EEF1DP29692 281 aaKnown RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 ARL1P40616 181 aaPredicted RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 PIK3CGP48736 1102 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 EMP3P54852 163 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 IRF8Q02556 426 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 SSPNQ14714 243 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 NAA30Q147X3 362 aaPredicted RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 ACAP2Q15057 778 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 ADGRD1Q6QNK2 874 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 TMIGD1Q6UXZ0 262 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 LANCL3Q6ZV70 420 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 GOLGA7Q7Z5G4 137 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 FDCSPQ8NFU4 85 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 RHEBL1Q8TAI7 183 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 NT5CQ8TCD5 201 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 UTP15Q8TED0 518 aaKnown RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 CREB3L4Q8TEY5 395 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 MVB12AQ96EY5 273 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 NSUN5Q96P11 429 aaKnown RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 GPRC5BQ9NZH0 403 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 LUZP4Q9P127 313 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 NXT1Q9UKK6 140 aaKnown RBP13.86□□□□□ -0.19
SF3B5-201ENST00000367569 MKL2Q9ULH7 1088 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 MAP4K5Q9Y4K4 846 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 ANGPTL3Q9Y5C1 460 aa13.86□□□□□ -0.19
SF3B5-201ENST00000367569 IGLV3-12A0A075B6K2 115 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 IGHV3-20A0A0C4DH32 117 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 A0A1W2PPM1 405 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 ERI3O43414 337 aaKnown RBP13.85□□□□□ -0.19
SF3B5-201ENST00000367569 GALR3O60755 368 aaPredicted RBP13.85□□□□□ -0.19
SF3B5-201ENST00000367569 VPS4BO75351 444 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 H2AFYO75367 372 aaKnown RBP13.85□□□□□ -0.19
SF3B5-201ENST00000367569 ALBP02768 609 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 HEXBP07686 556 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 PYGBP11216 843 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 ALOX12P18054 663 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 TSPAN8P19075 237 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 MMP11P24347 488 aa13.85□□□□□ -0.19
SF3B5-201ENST00000367569 CNTFP26441 200 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms