RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 NEK2P51955 445 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 RAP1GDS1P52306 607 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 YBX1P67809 324 aaKnown RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 CCL7P80098 99 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 KCNC4Q03721 635 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 TGM3Q08188 693 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SF3A3Q12874 501 aaKnown RBP eCLIP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 NFATC3Q12968 1075 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 MAD2L1Q13257 205 aaPredicted RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ILKQ13418 452 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SQSTM1Q13501 440 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SPIDRQ14159 915 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ISXQ2M1V0 245 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 GALNTL6Q49A17 601 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLC9B1Q4ZJI4 515 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SPIN4Q56A73 249 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZC3H12BQ5HYM0 836 aaKnown RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SPDYAQ5MJ70 313 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 VWA5B1Q5TIE3 1220 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 CACHD1Q5VU97 1274 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 HIST2H2BCQ6DN03 193 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 FCRL6Q6DN72 434 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 TMEM71Q6P5X7 295 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SCIMPQ6UWF3 145 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 PRICKLE2Q7Z3G6 844 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 TRIM46Q7Z4K8 759 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 B3GNT8Q7Z7M8 397 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ASPGQ86U10 573 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 KMT5CQ86Y97 462 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF655Q8N720 491 aaPredicted RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 MFSD9Q8NBP5 474 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF248Q8NDW4 579 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF740Q8NDX6 193 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 TRPV3Q8NET8 790 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 OR4D9Q8NGE8 314 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 CEP70Q8NHQ1 597 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 N4BP2L2Q92802 583 aaPredicted RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 MTFMTQ96DP5 389 aaKnown RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 RNF31Q96EP0 1072 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 CMTM7Q96FZ5 175 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 MAELQ96JY0 434 aaKnown RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 PPM1MQ96MI6 270 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 TRAPPC9Q96Q05 1148 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 GFM1Q96RP9 751 aaKnown RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 MTERF1Q99551 399 aaKnown RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SERPINI1Q99574 410 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 MAP3K3Q99759 626 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 EBF4Q9BQW3 602 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 NUDT22Q9BRQ3 303 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 CCDC28BQ9BUN5 200 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 NLNQ9BYT8 704 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 KLHL25Q9H0H3 589 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SPNS1Q9H2V7 528 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 RHBGQ9H310 441 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 TUBB1Q9H4B7 451 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 KCNK13Q9HB14 408 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 FANCEQ9HB96 536 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 PDE7BQ9NP56 450 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 FARSBQ9NSD9 589 aaKnown RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 IRAK4Q9NWZ3 460 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 VPS29Q9UBQ0 182 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZFP69BQ9UJL9 534 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 PPT2Q9UMR5 302 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLC12A4Q9UP95 1085 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 TMED5Q9Y3A6 229 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 PCDHGA4Q9Y5G9 962 aa6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 COL27A1Q8IZC6 1860 aaPredicted RBP6.47□□□□□ -1.37
RNU1-55P-201ENST00000365510 A0A0J9YVX5 310 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ATP6AP2A0A1C7CYW4 349 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 A0A1W2PQM1 296 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 URADA6NGE7 173 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 MAGEB17A8MXT2 336 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 NPIPB8E9PQR5 432 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 TXNDC9O14530 226 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 LSM1O15116 133 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZSCAN9O15535 394 aaPredicted RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CCDC22O60826 627 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CTSVO60911 334 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ATP6AP2O75787 350 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 MYO1DO94832 1006 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SEMA3DO95025 777 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 TNFSF15O95150 251 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SERPINA6P08185 405 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ANKRD34CP0C6C1 535 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PRR35P0CG20 571 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 THRAP10827 490 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ACPPP15309 386 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 LBPP18428 481 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PRPH2P23942 346 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PTX3P26022 381 aaPredicted RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 MAPK1P28482 360 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 STX1BP61266 288 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 STXBP1P61764 594 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 RPS13P62277 151 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ERVK-8P63133 956 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 RPL38P63173 70 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 IRX1P78414 480 aaPredicted RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 HSD11B2P80365 405 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 E2F1Q01094 437 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 HMGCS1Q01581 520 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms