RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 LDB1Q86U70 411 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ABHD5Q8WTS1 349 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 TM9SF2Q99805 663 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 SYNGR4O95473 234 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ADRB2P07550 413 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 GKN3PP0CG01 181 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CAPN3P20807 821 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 MOGSQ13724 837 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 PIGGQ5H8A4 983 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 LRRC66Q68CR7 880 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 AQP11Q8NBQ7 271 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 TERB2Q8NHR7 220 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 EXTL2Q9UBQ6 330 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 OR4F21O95013 312 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CCND3P30281 292 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 RPP30P78346 268 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 FOXM1Q08050 763 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 LRRC32Q14392 662 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 KIAA1614Q5VZ46 1190 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC2A11Q9BYW1 496 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CCDC163A0A0D9SF12 145 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 SMIM35A0A1B0GVV1 85 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CREBL2O60519 120 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 PAGE1O75459 146 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 GABRR2P28476 465 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 PBX3P40426 434 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 MBOAT1Q6ZNC8 495 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 DDX1Q92499 740 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ITPKCQ96DU7 683 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 MS4A12Q9NXJ0 267 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 PAHP00439 452 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 TEX44Q53QW1 395 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 PYROXD2Q8N2H3 581 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 LNX2Q8N448 690 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 OR4K17Q8NGC6 315 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 OR4K2Q8NGD2 314 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CYP2S1Q96SQ9 504 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 RPF2Q9H7B2 306 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 NLGN3Q9NZ94 848 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CNTN6Q9UQ52 1028 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 SMIM10L2AP0DMW4 78 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 SMIM10L2BP0DMW5 78 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 NCS1P62166 190 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 MARVELD2Q8N4S9 558 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 FOLH1BQ9HBA9 442 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 RPS10P5Q9NQ39 176 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 CTPS2Q9NRF8 586 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 GTF2F2P13984 249 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 OC90Q02509 493 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 C6orf120Q7Z4R8 191 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 NUDT13Q86X67 352 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF675Q8TD23 568 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 SHC3Q92529 594 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ADAD1Q96M93 576 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ASF1BQ9NVP2 202 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 ACSL5Q9ULC5 683 aa12.82□□□□□ -0.36
SRGAP3-201ENST00000360413 AP2A1O95782 977 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 RAB4BP61018 213 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 CD180Q99467 661 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 SULT4A1Q9BR01 284 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 STRA6Q9BX79 667 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 NPLQ9BXD5 320 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 SPATA31A1Q5TZJ5 1347 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 PABPC4LP0CB38 370 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 BCKDHAP12694 445 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 DYRK1AQ13627 763 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 TMEM156Q8N614 296 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 OR5T2Q8NGG2 359 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 CNTNAP3BQ96NU0 1288 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 SRRDQ9UH36 339 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 TNFP01375 233 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 EEFSECP57772 596 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 LSAMPQ13449 338 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 TRIB2Q92519 343 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 FAIMQ9NVQ4 179 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 VNN3Q9NY84 501 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 ACTR3BQ9P1U1 418 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 NUP214P35658 2090 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 A0A1B0GV50 99 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 ANKRD33BA6NCL7 494 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 RHOQP17081 205 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 RIN1Q13671 783 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 EXOC3L2Q2M3D2 409 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 NKAPLQ5M9Q1 402 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 PSD4Q8NDX1 1056 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 MOAP1Q96BY2 351 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF486Q96H40 463 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 USB1Q9BQ65 265 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 FOXD2O60548 495 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 IDH3GP51553 393 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 UBE2UQ5VVX9 321 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 TNFAIP8L2Q6P589 184 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 CHPT1Q8WUD6 406 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 PPA2Q9H2U2 334 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 H3BSH0 61 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms