RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 A0A1W2PQH9 124 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 H3BSA7 217 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 TBX10O75333 385 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 PTTG1O95997 202 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 RAB3BP20337 219 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 IMPDH1P20839 514 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 ERVK-21P61565 698 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 DHCR24Q15392 516 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CDNFQ49AH0 187 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 GLYATL2Q8WU03 294 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 TLCD1Q96CP7 247 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 Q9N2J8 555 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF705FA8MVS1 300 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 DIRAS3O95661 229 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF705DP0CH99 300 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF705BP0CI00 300 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 ZBTB48P10074 688 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 SLC39A4Q6P5W5 647 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 HERC2P3Q9BVR0 1158 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 PCDHB11Q9Y5F2 797 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 MANSC4A6NHS7 340 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 OR6C75A6NL08 312 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 MUSKO15146 869 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CASC3O15234 703 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CAPN5O15484 640 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 AHSA1O95433 338 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CELF3Q5SZQ8 465 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 PLEKHO2Q8TD55 490 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 C10orf82Q8WW14 230 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 BTBD2Q9BX70 525 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 DEC1Q9P2X7 70 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 TGFBIQ15582 683 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CYP2W1Q8TAV3 490 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 MAPK15Q8TD08 544 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 PYURFQ96I23 114 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CGREF1Q99674 301 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CDC14AQ9UNH5 594 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CNTNAP4Q9C0A0 1308 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 RGS9O75916 674 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CSF2P04141 144 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 RFX5P48382 616 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 RIN1Q13671 783 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MOGSQ13724 837 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CLCA4Q14CN2 919 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PRAMEF13Q5VWM6 474 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NOXRED1Q6NXP6 359 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 IRF2BP2Q7Z5L9 587 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SLC15A3Q8IY34 581 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NSMAFQ92636 917 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 HBEGFQ99075 208 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SAMD10Q9BYL1 202 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ADAMTS10Q9H324 1103 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NANSQ9NR45 359 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ZCCHC3Q9NUD5 404 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 C7P10643 843 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SLC18A1P54219 525 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 TARBP2Q15633 366 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 KCTD18Q6PI47 426 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CEACAM20Q6UY09 585 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PKP4Q99569 1192 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MAGEH1Q9H213 219 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PPA2Q9H2U2 334 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 UTS2RQ9UKP6 389 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 C9JVG2 144 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 RGL2O15211 777 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MSI1O43347 362 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CSNK2A2P19784 350 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 AMZ2Q86W34 360 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 AGXT2Q9BYV1 514 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 DNAJC5Q9H3Z4 198 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 GPATCH2Q9NW75 528 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 J3QRK9 145 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SNAPINO95295 136 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 FBXL8Q96CD0 374 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PTPN18Q99952 460 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MROQ9BYG7 248 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ACP6Q9NPH0 428 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 EPHA6Q9UF33 1036 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PCDHB14Q9Y5E9 798 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM14AQ9Y6G1 99 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 TRBC2A0A5B9 178 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 FAM170BA6NMN3 283 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SHOXO15266 292 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CLN5O75503 358 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 FPR1P21462 350 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 TAS2R20P59543 309 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NTRK2Q16620 822 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ODF4Q2M2E3 257 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 FNDC8Q8TC99 324 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 TFB2MQ9H5Q4 396 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 POP4O95707 220 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CRYZL1O95825 349 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NMBRP28336 390 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 AFF3P51826 1226 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MLLT1Q03111 559 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NAT16Q8N8M0 369 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ALG3Q92685 438 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NKD2Q969F2 451 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 BLOC1S5-TXNDC5H3BN57 136 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms