RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TBCCD1Q9NVR7 557 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 MARK1Q9P0L2 795 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 PCTPQ9UKL6 214 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 PLAGL1Q9UM63 463 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ADAMTS5Q9UNA0 930 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 RP1L1Q8IWN7 2480 aaPredicted RBP13.26□□□□□ -0.29
VCP-201ENST00000358901 TSPAN6O43657 245 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 APOL3O95236 402 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ITIH1P19827 911 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 IGFALSP35858 605 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 GALNT1Q10472 559 aaPredicted RBP13.26□□□□□ -0.29
VCP-201ENST00000358901 PMS2P3Q13401 168 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 HSDL2Q6YN16 418 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 ATCAYQ86WG3 371 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 SCML4Q8N228 414 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 OR9A1PQ8NGU1 263 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 RAB11FIP5Q9BXF6 653 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 GSTO2Q9H4Y5 243 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 FARSBQ9NSD9 589 aaKnown RBP13.26□□□□□ -0.29
VCP-201ENST00000358901 TMEM98Q9Y2Y6 226 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 OARD1Q9Y530 152 aa13.26□□□□□ -0.29
VCP-201ENST00000358901 YES1P07947 543 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 ALPPL2P10696 532 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 CKMT1AP12532 417 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 HMGCLP35914 325 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 SLC3A1Q07837 685 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 ST3GAL3Q11203 375 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PAGE3Q5JUK9 113 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 IRAK1BP1Q5VVH5 260 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 BTN2A1Q7KYR7 527 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 GRHL3Q8TE85 626 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 EFHD2Q96C19 240 aaPredicted RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 L3HYPDHQ96EM0 354 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 EIF3KQ9UBQ5 218 aaKnown RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 STOML2Q9UJZ1 356 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 TBC1D24Q9ULP9 559 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 KCNK6Q9Y257 313 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 A0A1W2PQ72 361 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 CCRL2O00421 344 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PRMT3O60678 531 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 CPNE3O75131 537 aaKnown RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 HPRP00739 348 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 CD2P06729 351 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PTNP21246 168 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 KCNA5P22460 613 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 AKT2P31751 481 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 FOXA1P55317 472 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 NFATC3Q12968 1075 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 NPRL3Q12980 569 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 SP140Q13342 867 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PLEKHS1Q5SXH7 462 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 TRNP1Q6NT89 227 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 ACVR1CQ8NER5 493 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 SUN5Q8TC36 379 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PHOX2BQ99453 314 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 SLC28A3Q9HAS3 691 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 TAS2R9Q9NYW1 312 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 ZNF879B4DU55 563 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 H7BY64 318 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 S100A9P06702 114 aaKnown RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 MYF6P23409 242 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 GNALP38405 381 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 GBX2P52951 348 aaPredicted RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 C18orf21Q32NC0 220 aaPredicted RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 GTDC1Q4AE62 458 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 C10orf62Q5T681 223 aaPredicted RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 VTCN1Q7Z7D3 282 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 TMEM80Q96HE8 168 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PRAP1Q96NZ9 151 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 WACQ9BTA9 647 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 SEZ6LQ9BYH1 1024 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 SRRDQ9UH36 339 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 SLC1A7O00341 560 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 PPP6CO00743 305 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 STC2O76061 302 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 HLA-EP13747 358 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 ACVR2AP27037 513 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 ETV3P41162 512 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 CDKL1Q00532 357 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 GINS1Q14691 196 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 OR52E8Q6IFG1 317 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 MAMDC4Q6UXC1 1216 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 OR8H3Q8N146 312 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 NKD1Q969G9 470 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 DOHHQ9BU89 302 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 MKKSQ9NPJ1 570 aaPredicted RBP13.25□□□□□ -0.29
VCP-201ENST00000358901 SLCO3A1Q9UIG8 710 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 MED31Q9Y3C7 131 aa13.25□□□□□ -0.29
VCP-201ENST00000358901 C2orf92A0A1B0GVN3 265 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 SLC35F4A4IF30 521 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ZNF840PA6NDX5 716 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 STSP08842 583 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 CELP19835 753 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 DNASE1L1P49184 302 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 CDKN1CP49918 316 aaPredicted RBP13.24□□□□□ -0.29
VCP-201ENST00000358901 CD47Q08722 323 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms