RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PCDHB3Q9Y5E6 796 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
CCNE1-202ENST00000357943 FRYQ5TBA9 3013 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 AKAP13Q12802 2813 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 SKAP2O75563 359 aaPredicted RBP14.14□□□□□ -0.15
CCNE1-202ENST00000357943 KIAA0754O94854 1291 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 B3GALT4O96024 378 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 ADRB1P08588 477 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 RAB8AP61006 207 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 HMGCS1Q01581 520 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 GABPB1Q06547 395 aaPredicted RBP14.14□□□□□ -0.15
CCNE1-202ENST00000357943 TOR1AIP1Q5JTV8 583 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 DEPDC1Q5TB30 811 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 TMEM164Q5U3C3 297 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 KHDRBS2Q5VWX1 349 aaKnown RBP14.14□□□□□ -0.15
CCNE1-202ENST00000357943 TTLL10Q6ZVT0 673 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 PRSS41Q7RTY9 318 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
CCNE1-202ENST00000357943 ZPBPQ9BS86 351 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 NDC1Q9BTX1 674 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 ACPTQ9BZG2 426 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 ULBP3Q9BZM4 244 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 SLC7A5P2Q9GIP4 190 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 CCDC134Q9H6E4 229 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 ACTR5Q9H9F9 607 aaPredicted RBP14.14□□□□□ -0.15
CCNE1-202ENST00000357943 BRF2Q9HAW0 419 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 PSD3Q9NYI0 1048 aa14.14□□□□□ -0.15
CCNE1-202ENST00000357943 A0A0G2JN53 185 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 TRABD2BA6NFA1 517 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 PIP5K1BO14986 540 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 ERI3O43414 337 aaKnown RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 SHOX2O60902 331 aaPredicted RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 CHEK2O96017 543 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 LINC00032P0C843 101 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF888P0CJ79 500 aaPredicted RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 SMIM10L1P0DMW3 83 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 IL1RNP18510 177 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 ALAS2P22557 587 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 PTX3P26022 381 aaPredicted RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 PLA2G16P53816 162 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 STXBP1P61764 594 aaKnown RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 RTP5Q14D33 572 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 PDCD2Q16342 344 aaPredicted RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 MUM1Q2TAK8 710 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 FAM214AQ32MH5 1076 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 TUBB8Q3ZCM7 444 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 GARNL3Q5VVW2 1013 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 RHBDD2Q6NTF9 364 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 CHSY3Q70JA7 882 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 TRIM46Q7Z4K8 759 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 CRLF3Q8IUI8 442 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 DDIASQ8IXT1 998 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 METTL27Q8N6F8 245 aaPredicted RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 PIWIL2Q8TC59 973 aaKnown RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 UTP15Q8TED0 518 aaKnown RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 SMIM10Q96HG1 83 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 TEFMQ96QE5 360 aaKnown RBP14.13□□□□□ -0.15
CCNE1-202ENST00000357943 C17orf62Q9BQA9 187 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 ASCL3Q9NQ33 180 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 PPT2Q9UMR5 302 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 SLC12A4Q9UP95 1085 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 CFAP47Q6ZTR5 3102 aa14.13□□□□□ -0.15
CCNE1-202ENST00000357943 TEX51A0A1B0GUA7 166 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SERTM1A2A2V5 107 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 URADA6NGE7 173 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 CDRT15L2A8MXV6 281 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 RTCAO00442 366 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 PLPP1O14494 284 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 NVLO15381 856 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 FOXS1O43638 330 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 CPNE3O75131 537 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 STK17BO94768 372 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 HSD3B1P14060 373 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ALOX12P18054 663 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 HSD3B2P26439 372 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 RBMS1P29558 406 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ARSFP54793 590 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 EMP3P54852 163 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF33BQ06732 778 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 CSTF3Q12996 717 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 CUL3Q13618 768 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 FAM53BQ14153 422 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 TERF2Q15554 542 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 C1orf189Q5VU69 101 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ABHD17CQ6PCB6 329 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 Q6ZSR9 355 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 UBE3DQ7Z6J8 389 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 PDSS2Q86YH6 399 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 AFAP1L2Q8N4X5 818 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 GBP7Q8N8V2 638 aaPredicted RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 OR2L5Q8NG80 312 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 OR2T11Q8NH01 316 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 GAL3ST3Q96A11 431 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 CLIP3Q96DZ5 547 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 PPP1R36Q96LQ0 422 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 C3orf30Q96M34 536 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 MRPL1Q9BYD6 325 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 NUF2Q9BZD4 464 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 LHX9Q9NQ69 397 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 VPS29Q9UBQ0 182 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms