RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PROSER1Q86XN7 944 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TTLQ8NG68 377 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 GPR151Q8TDV0 419 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TRIM45Q9H8W5 580 aaPredicted RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 STARD7Q9NQZ5 370 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 SLC6A13Q9NSD5 602 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 NUDT4Q9NZJ9 180 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TRPM5Q9NZQ8 1165 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 M0R129 80 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 SLC9A3R1O14745 358 aaPredicted RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 DSCR3O14972 297 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 CAPN5O15484 640 aaPredicted RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 TAPBPO15533 448 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 KLK8O60259 260 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ULK1O75385 1050 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 SNX4O95219 450 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ZDHHC11BP0C7U3 371 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 C7P10643 843 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 UMPSP11172 480 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ZNF7P17097 686 aaPredicted RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 AKT1P31749 480 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 CYP4F8P98187 520 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 CACNG1Q06432 222 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 GPR50Q13585 617 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TMEM65Q6PI78 240 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 FAM131AQ6UXB0 335 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 Q6ZPB1 254 aaPredicted RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 TPGS1Q6ZTW0 290 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ANKS3Q6ZW76 656 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TMEM179BQ7Z7N9 219 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ATG16L2Q8NAA4 619 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TSPEARQ8WU66 669 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 SLC47A1Q96FL8 570 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TOE1Q96GM8 510 aaKnown RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 SCLYQ96I15 445 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 OR52E6Q96RD3 313 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 USB1Q9BQ65 265 aaKnown RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 ABCB8Q9NUT2 735 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 RIMKLBQ9ULI2 386 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 LYVE1Q9Y5Y7 322 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 TANC1Q9C0D5 1861 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 AOC2O75106 756 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ZNF682O95780 498 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RAP2AP10114 183 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 SSTR2P30874 369 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 NUDT1P36639 197 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RGS4P49798 205 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 PWP1Q13610 501 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 COL19A1Q14993 1142 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 SUSD1Q6UWL2 747 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 TSPAN33Q86UF1 283 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RGL4Q8IZJ4 473 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 APCDD1Q8J025 514 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RNF175Q8N4F7 328 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 OR4M2Q8NGB6 313 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 BPIFB1Q8TDL5 484 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 AUTS2Q8WXX7 1259 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 TMCO6Q96DC7 493 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 MYO19Q96H55 970 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RNF170Q96K19 258 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 CASD1Q96PB1 797 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 BARD1Q99728 777 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 ITPAQ9BY32 194 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 FAM126AQ9BYI3 521 aaPredicted RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 SERHL2Q9H4I8 314 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ZFYVE1Q9HBF4 777 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 SNTG1Q9NSN8 517 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 UPK1AO00322 258 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 PSIP1O75475 530 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 PRSS23O95084 383 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 C1QCP02747 245 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ERP29P30040 261 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 IDH2P48735 452 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 GABARAPL2P60520 117 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 FAM189BP81408 668 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 MVKQ03426 396 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 MED22Q15528 200 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 SPOUT1Q5T280 376 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 NCEH1Q6PIU2 408 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 LIPIQ6XZB0 460 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 C10orf111Q8N326 155 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 CHCHD4Q8N4Q1 142 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 SLC38A4Q969I6 547 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RADILQ96JH8 1075 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 FRMD6Q96NE9 622 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 OR2A14Q96R47 310 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RBM4BQ9BQ04 359 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 CNPPD1Q9BV87 410 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 DPCDQ9BVM2 203 aaPredicted RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 RBM4Q9BWF3 364 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 FAM83DQ9H4H8 585 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 MCUBQ9NWR8 336 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 LHX3Q9UBR4 397 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 PEX16Q9Y5Y5 336 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 SHOXO15266 292 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 FKTNO75072 461 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ITGA2P17301 1181 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 GGT1P19440 569 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 CD6P30203 668 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms