RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FBXL6Q8N531 539 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 GEMIN6Q8WXD5 167 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 TMEM143Q96AN5 459 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 LRCH3Q96II8 777 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ABCG4Q9H172 646 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 PRDM12Q9H4Q4 367 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 FAM124BQ9H5Z6 455 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 TAS2R8Q9NYW2 309 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 RAB3DO95716 219 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 EPOP01588 193 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 RETP07949 1114 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 GKN3PP0CG01 181 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 DPP6P42658 865 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CRKLP46109 303 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 PITPNBP48739 271 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SRSF11Q05519 484 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 MLC1Q15049 377 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CNIH2Q6PI25 160 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 PRSS55Q6UWB4 352 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 C17orf107Q6ZR85 190 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 OR56B4Q8NH76 319 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 YIPF4Q9BSR8 244 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 MED18Q9BUE0 208 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 DZANK1Q9NVP4 752 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CYB5R1Q9UHQ9 305 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CACNA1BQ00975 2339 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 OR6C74A6NCV1 312 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 PHYHO14832 338 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 TP73O15350 636 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 B4GAT1O43505 415 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 TPT1P13693 172 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 IRF9Q00978 393 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 C2orf80Q0P641 193 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 LIPKQ5VXJ0 399 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZNF704Q6ZNC4 412 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 GIMAP1Q8WWP7 306 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 TMEM41AQ96HV5 264 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 FYTTD1Q96QD9 318 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 GPR22Q99680 433 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SPON2Q9BUD6 331 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 POLR2J3Q9H1A7 115 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 FNIP2Q9P278 1114 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 AP1M2Q9Y6Q5 423 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 XRN1Q8IZH2 1706 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 ATRNL1Q5VV63 1379 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 D6RAR5 112 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ADORA3P0DMS8 318 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CKBP12277 381 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 RARRES1P49788 294 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SMSP52788 366 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZNF674Q2M3X9 581 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 PLEKHN1Q494U1 663 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 FAM209BQ5JX69 171 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 NOL9Q5SY16 702 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 HIST2H3PS2Q5TEC6 136 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 LILRA2Q8N149 483 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 EXOSC8Q96B26 276 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 RAB3CQ96E17 227 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 EIF5A2Q9GZV4 153 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 CALML5Q9NZT1 146 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ACAD8Q9UKU7 415 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 NOP16Q9Y3C1 178 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 BHMG1C9JSJ3 638 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 F5H5P2 479 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 DLX3O60479 287 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 BCKDHAP12694 445 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 HOXD8P13378 290 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 GTF2F2P13984 249 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CALCRP30988 508 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 L1CAMP32004 1257 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 KCNQ1P51787 676 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 GALK2Q01415 458 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 PPP1R26Q5T8A7 1209 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZNF697Q5TEC3 545 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ATG9BQ674R7 924 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 GDPD3Q7L5L3 318 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 OR4F6Q8NGB9 312 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 HCAR2Q8TDS4 363 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SAP130Q9H0E3 1048 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ACOXLQ9NUZ1 547 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 LUZP4Q9P127 313 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ABCA1O95477 2261 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZNF536O15090 1300 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 MROH6A6NGR9 719 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 NME6O75414 186 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 ADRB2P07550 413 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CD63P08962 238 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 VAMP1P23763 118 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SSTR2P30874 369 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 RPS19P39019 145 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 SIX1Q15475 284 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 GRHL2Q6ISB3 625 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 DOK6Q6PKX4 331 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZPBP2Q6X784 338 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SPATC1Q76KD6 591 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 TMEM192Q8IY95 271 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZNF433Q8N7K0 673 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 OR9I1Q8NGQ6 314 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 TMED9Q9BVK6 235 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 MFFQ9GZY8 342 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms