RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 EIF3FO00303 357 aaPredicted RBP17.16■□□□□ 0.34
APP-202ENST00000348990 CRYZL1O95825 349 aa17.16■□□□□ 0.34
APP-202ENST00000348990 HLA-EP13747 358 aa17.16■□□□□ 0.34
APP-202ENST00000348990 AMD1P17707 334 aa17.16■□□□□ 0.34
APP-202ENST00000348990 IFNA8P32881 189 aa17.16■□□□□ 0.34
APP-202ENST00000348990 DDOSTP39656 456 aa17.16■□□□□ 0.34
APP-202ENST00000348990 IFI44LQ53G44 452 aa17.16■□□□□ 0.34
APP-202ENST00000348990 PLET1Q6UQ28 207 aa17.16■□□□□ 0.34
APP-202ENST00000348990 OR5AK3PQ8NH89 298 aa17.16■□□□□ 0.34
APP-202ENST00000348990 FRMD6Q96NE9 622 aa17.16■□□□□ 0.34
APP-202ENST00000348990 NXF2Q9GZY0 626 aaKnown RBP17.16■□□□□ 0.34
APP-202ENST00000348990 CLEC2DQ9UHP7 191 aa17.16■□□□□ 0.34
APP-202ENST00000348990 PCDHB11Q9Y5F2 797 aa17.16■□□□□ 0.34
APP-202ENST00000348990 MN1Q10571 1320 aaPredicted RBP17.16■□□□□ 0.34
APP-202ENST00000348990 FAM227AF5H4B4 570 aa17.16■□□□□ 0.34
APP-202ENST00000348990 TNFRSF21O75509 655 aa17.16■□□□□ 0.34
APP-202ENST00000348990 CORO1AP31146 461 aaKnown RBP17.16■□□□□ 0.34
APP-202ENST00000348990 RFX2P48378 723 aa17.16■□□□□ 0.34
APP-202ENST00000348990 CCL23P55773 120 aa17.16■□□□□ 0.34
APP-202ENST00000348990 GPAT3Q53EU6 434 aa17.16■□□□□ 0.34
APP-202ENST00000348990 DENND6BQ8NEG7 585 aa17.16■□□□□ 0.34
APP-202ENST00000348990 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
APP-202ENST00000348990 SNAPC3Q92966 411 aa17.16■□□□□ 0.34
APP-202ENST00000348990 GABARAPL3Q9BY60 117 aa17.16■□□□□ 0.34
APP-202ENST00000348990 CRISPLD1Q9H336 500 aa17.16■□□□□ 0.34
APP-202ENST00000348990 NPAP1Q9NZP6 1156 aa17.16■□□□□ 0.34
APP-202ENST00000348990 DNMT3LQ9UJW3 386 aa17.16■□□□□ 0.34
APP-202ENST00000348990 SSR3Q9UNL2 185 aa17.16■□□□□ 0.34
APP-202ENST00000348990 CLCA3PQ9Y6N3 262 aa17.16■□□□□ 0.34
APP-202ENST00000348990 A0A1W2PQ72 361 aa17.15■□□□□ 0.34
APP-202ENST00000348990 KPNA5O15131 536 aa17.15■□□□□ 0.34
APP-202ENST00000348990 ANXA4P09525 319 aaPredicted RBP17.15■□□□□ 0.34
APP-202ENST00000348990 CYP4F8P98187 520 aa17.15■□□□□ 0.34
APP-202ENST00000348990 MFSD14CQ5VZR4 134 aa17.15■□□□□ 0.34
APP-202ENST00000348990 TRIM69Q86WT6 500 aa17.15■□□□□ 0.34
APP-202ENST00000348990 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
APP-202ENST00000348990 FUBP3Q96I24 572 aaKnown RBP eCLIP17.15■□□□□ 0.34
APP-202ENST00000348990 PLCXD1Q9NUJ7 323 aa17.15■□□□□ 0.34
APP-202ENST00000348990 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
APP-202ENST00000348990 C12orf71A8MTZ7 269 aa17.15■□□□□ 0.34
APP-202ENST00000348990 MEN1O00255 615 aa17.15■□□□□ 0.34
APP-202ENST00000348990 GADD45GO95257 159 aa17.15■□□□□ 0.34
APP-202ENST00000348990 PSKH1P11801 424 aa17.15■□□□□ 0.34
APP-202ENST00000348990 CD9P21926 228 aa17.15■□□□□ 0.34
APP-202ENST00000348990 SIMC1Q8NDZ2 872 aa17.15■□□□□ 0.34
APP-202ENST00000348990 NFKBIDQ8NI38 313 aa17.15■□□□□ 0.34
APP-202ENST00000348990 SLC7A6Q92536 515 aa17.15■□□□□ 0.34
APP-202ENST00000348990 ACSL6Q9UKU0 697 aa17.15■□□□□ 0.34
APP-202ENST00000348990 CFAP20Q9Y6A4 193 aaKnown RBP17.15■□□□□ 0.34
APP-202ENST00000348990 LOC285556D6RIA3 1793 aa17.15■□□□□ 0.34
APP-202ENST00000348990 YY2O15391 372 aa17.15■□□□□ 0.34
APP-202ENST00000348990 ICMTO60725 284 aa17.15■□□□□ 0.34
APP-202ENST00000348990 MTX2O75431 263 aa17.15■□□□□ 0.34
APP-202ENST00000348990 LEXMQ3ZCV2 418 aa17.15■□□□□ 0.34
APP-202ENST00000348990 TP53I13Q8NBR0 393 aaPredicted RBP17.15■□□□□ 0.34
APP-202ENST00000348990 C9orf43Q8TAL5 461 aaPredicted RBP17.15■□□□□ 0.34
APP-202ENST00000348990 TBC1D20Q96BZ9 403 aa17.15■□□□□ 0.34
APP-202ENST00000348990 MCCC1Q96RQ3 725 aaPredicted RBP17.15■□□□□ 0.34
APP-202ENST00000348990 PKP4Q99569 1192 aa17.15■□□□□ 0.34
APP-202ENST00000348990 ASIC5Q9NY37 505 aa17.15■□□□□ 0.34
APP-202ENST00000348990 STMN3Q9NZ72 180 aa17.15■□□□□ 0.34
APP-202ENST00000348990 VPS29Q9UBQ0 182 aa17.15■□□□□ 0.34
APP-202ENST00000348990 PCDHGB2Q9Y5G2 931 aa17.15■□□□□ 0.34
APP-202ENST00000348990 PCDHGA2Q9Y5H1 932 aa17.15■□□□□ 0.34
APP-202ENST00000348990 NT5C1B-RDH14C9J2C7 533 aa17.14■□□□□ 0.33
APP-202ENST00000348990 GPLD1P80108 840 aa17.14■□□□□ 0.33
APP-202ENST00000348990 HNRNPA0Q13151 305 aaKnown RBP17.14■□□□□ 0.33
APP-202ENST00000348990 RGNQ15493 299 aa17.14■□□□□ 0.33
APP-202ENST00000348990 GPRC6AQ5T6X5 926 aa17.14■□□□□ 0.33
APP-202ENST00000348990 BCDIN3DQ7Z5W3 292 aaKnown RBP17.14■□□□□ 0.33
APP-202ENST00000348990 C1orf52Q8N6N3 182 aaKnown RBP17.14■□□□□ 0.33
APP-202ENST00000348990 C19orf18Q8NEA5 215 aa17.14■□□□□ 0.33
APP-202ENST00000348990 RASSF5Q8WWW0 418 aa17.14■□□□□ 0.33
APP-202ENST00000348990 UROC1Q96N76 676 aa17.14■□□□□ 0.33
APP-202ENST00000348990 C11orf54Q9H0W9 315 aaPredicted RBP17.14■□□□□ 0.33
APP-202ENST00000348990 DNAJC11Q9NVH1 559 aa17.14■□□□□ 0.33
APP-202ENST00000348990 APOL3O95236 402 aa17.14■□□□□ 0.33
APP-202ENST00000348990 CYP17A1P05093 508 aa17.14■□□□□ 0.33
APP-202ENST00000348990 ZNF865P0CJ78 1059 aaPredicted RBP17.14■□□□□ 0.33
APP-202ENST00000348990 CHI3L1P36222 383 aaPredicted RBP17.14■□□□□ 0.33
APP-202ENST00000348990 TUFMP49411 452 aaKnown RBP17.14■□□□□ 0.33
APP-202ENST00000348990 SELENOWP63302 87 aa17.14■□□□□ 0.33
APP-202ENST00000348990 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.14■□□□□ 0.33
APP-202ENST00000348990 MICAQ29983 383 aa17.14■□□□□ 0.33
APP-202ENST00000348990 LRRC73Q5JTD7 316 aa17.14■□□□□ 0.33
APP-202ENST00000348990 ALG1LQ6GMV1 187 aa17.14■□□□□ 0.33
APP-202ENST00000348990 MRPL10Q7Z7H8 261 aaKnown RBP17.14■□□□□ 0.33
APP-202ENST00000348990 ASB15Q8WXK1 588 aa17.14■□□□□ 0.33
APP-202ENST00000348990 OMA1Q96E52 524 aa17.14■□□□□ 0.33
APP-202ENST00000348990 KCTD5Q9NXV2 234 aa17.14■□□□□ 0.33
APP-202ENST00000348990 CMAHPQ9Y471 501 aa17.14■□□□□ 0.33
APP-202ENST00000348990 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
APP-202ENST00000348990 PIKFYVEQ9Y2I7 2098 aa17.14■□□□□ 0.33
APP-202ENST00000348990 DOCK4Q8N1I0 1966 aa17.14■□□□□ 0.33
APP-202ENST00000348990 TRAV19A0A0A6YYK7 116 aa17.14■□□□□ 0.33
APP-202ENST00000348990 MYL12BO14950 172 aa17.14■□□□□ 0.33
APP-202ENST00000348990 ENTPD6O75354 484 aa17.14■□□□□ 0.33
APP-202ENST00000348990 UGT2B17O75795 530 aa17.14■□□□□ 0.33
APP-202ENST00000348990 ARF5P84085 180 aa17.14■□□□□ 0.33
APP-202ENST00000348990 BCL2L1Q07817 233 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms