RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 TSSK3Q96PN8 268 aa17.57■□□□□ 0.4
SNCG-201ENST00000348795 NRTNQ99748 197 aa17.57■□□□□ 0.4
SNCG-201ENST00000348795 SH3GL1Q99961 368 aa17.57■□□□□ 0.4
SNCG-201ENST00000348795 SLC6A16Q9GZN6 736 aa17.57■□□□□ 0.4
SNCG-201ENST00000348795 FAM120CQ9NX05 1096 aaKnown RBP17.57■□□□□ 0.4
SNCG-201ENST00000348795 PILRAQ9UKJ1 303 aa17.57■□□□□ 0.4
SNCG-201ENST00000348795 HEATR5BQ9P2D3 2071 aa17.57■□□□□ 0.4
SNCG-201ENST00000348795 CACNA1EQ15878 2313 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 PRR33A8MZF0 331 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 TBX19O60806 448 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 ERN1O75460 977 aaKnown RBP17.56■□□□□ 0.4
SNCG-201ENST00000348795 KCNH1O95259 989 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 TYRP1P17643 537 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 CAPN3P20807 821 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 PPM1FP49593 454 aaPredicted RBP17.56■□□□□ 0.4
SNCG-201ENST00000348795 MAPK12P53778 367 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 YBX1P67809 324 aaKnown RBP17.56■□□□□ 0.4
SNCG-201ENST00000348795 RAE1P78406 368 aaKnown RBP17.56■□□□□ 0.4
SNCG-201ENST00000348795 SLC25A3Q00325 362 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 SQSTM1Q13501 440 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 TRMT5Q32P41 509 aaKnown RBP17.56■□□□□ 0.4
SNCG-201ENST00000348795 FCRL6Q6DN72 434 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 FBXO42Q6P3S6 717 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 BNC2Q6ZN30 1099 aaPredicted RBP17.56■□□□□ 0.4
SNCG-201ENST00000348795 ABHD13Q7L211 337 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 KMT5CQ86Y97 462 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 SLC35F3Q8IY50 421 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 ZCCHC7Q8N3Z6 543 aaKnown RBP17.56■□□□□ 0.4
SNCG-201ENST00000348795 KIF2BQ8N4N8 673 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 ITCHQ96J02 903 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 OR2A5Q96R48 311 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 F2RL3Q96RI0 385 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 THTPAQ9BU02 230 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 FAIM2Q9BWQ8 316 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 REEP4Q9H6H4 257 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 SPAG4Q9NPE6 437 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 SLC52A3Q9NQ40 469 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 ATP6V1HQ9UI12 483 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 PCDHGB2Q9Y5G2 931 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 RNF215Q9Y6U7 377 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 GON4LQ3T8J9 2241 aa17.56■□□□□ 0.4
SNCG-201ENST00000348795 FBP2O00757 339 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 PLPP1O14494 284 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 KHNYNO15037 678 aaKnown RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 SCAMP2O15127 329 aaKnown RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 TOX3O15405 576 aaPredicted RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 DNAJA2O60884 412 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 KLK1P06870 262 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 COX7A2P14406 83 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 DRD2P14416 443 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 BSGP35613 385 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 ZFP36L2P47974 494 aaKnown RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 TRPC1P48995 793 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 ATXN3P54252 364 aaPredicted RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 CYP4F2P78329 520 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 NFYCQ13952 458 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 SLC9A5Q14940 896 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 TLR1Q15399 786 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 FAM174BQ3ZCQ3 159 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 CPTPQ5TA50 214 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 ADNP2Q6IQ32 1131 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 IRGCQ6NXR0 463 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 WDR74Q6RFH5 385 aaPredicted RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 RNF175Q8N4F7 328 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 C19orf47Q8N9M1 422 aaKnown RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 C16orf78Q8WTQ4 265 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 MS4A6EQ96DS6 147 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 TEX37Q96LM6 180 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 TRAPPC9Q96Q05 1148 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 OR52E6Q96RD3 313 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 NPAS2Q99743 824 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 BHLHE41Q9C0J9 482 aaPredicted RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 RASSF4Q9H2L5 321 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 COPS7BQ9H9Q2 264 aaPredicted RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 PRDM9Q9NQV7 894 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 LYARQ9NX58 379 aaKnown RBP17.55■□□□□ 0.4
SNCG-201ENST00000348795 BAIAP2L1Q9UHR4 511 aa17.55■□□□□ 0.4
SNCG-201ENST00000348795 IGHV1OR21-1A0A087WYE8 117 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 ANKRD65E5RJM6 399 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 TNFRSF10AO00220 468 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 GIMD1P0DJR0 217 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 IL12AP29459 219 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 SSR2P43308 183 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 PSME3P61289 254 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 KCNJ2P63252 427 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 TIGD2Q4W5G0 525 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 TOR1AIP1Q5JTV8 583 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 TCTE1Q5JU00 501 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 SAMD4BQ5PRF9 694 aaKnown RBP17.54■□□□□ 0.4
SNCG-201ENST00000348795 FAM219BQ5XKK7 198 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 LAIR1Q6GTX8 287 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 ABHD17CQ6PCB6 329 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 FBXW8Q8N3Y1 598 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■■■ 33.1
SNCG-201ENST00000348795 LRRC58Q96CX6 371 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 COQ8BQ96D53 544 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 CCDC3Q9BQI4 270 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 CLK4Q9HAZ1 481 aaKnown RBP17.54■□□□□ 0.4
SNCG-201ENST00000348795 PDE7BQ9NP56 450 aa17.54■□□□□ 0.4
SNCG-201ENST00000348795 EHD3Q9NZN3 535 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms