RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PCDH10Q9P2E7 1040 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 MTMR11A4FU01 709 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 NPIPA2E9PIF3 369 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 NPIPA3F8WFD2 350 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF33AQ06730 810 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 C3orf33Q6P1S2 294 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 SLC2A7Q6PXP3 512 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 ASB18Q6ZVZ8 466 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 HSH2DQ96JZ2 352 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 EBF4Q9BQW3 602 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 PCDHAC1Q9H158 963 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 MS4A12Q9NXJ0 267 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 TAS2R9Q9NYW1 312 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 TELO2Q9Y4R8 837 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 CDH11P55287 796 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 SPATS1Q496A3 300 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 KHDC1Q4VXA5 237 aaKnown RBP22.36■■□□□ 1.17
NPAS3-201ENST00000346562 PIM3Q86V86 326 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 EZH1Q92800 747 aaPredicted RBP22.36■■□□□ 1.17
NPAS3-201ENST00000346562 POLR2CP19387 275 aaPredicted RBP22.36■■□□□ 1.17
NPAS3-201ENST00000346562 TREML1Q86YW5 311 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 NAXEQ8NCW5 288 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 ALPK1Q96QP1 1244 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 A6NCN8 305 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 E2F3O00716 465 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 C6orf47O95873 294 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 BCKDHAP12694 445 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 FOXK1P85037 733 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 KCNJ11Q14654 390 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 RAB11FIP2Q7L804 512 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 OR8D2Q9GZM6 311 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 PDE7BQ9NP56 450 aa22.36■■□□□ 1.17
NPAS3-201ENST00000346562 SH3PXD2BA1X283 911 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 SH3D21A4FU49 640 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 PDYNP01213 254 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 HRH2P25021 359 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 IL1R2P27930 398 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 GPRC6AQ5T6X5 926 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 TMEM139Q8IV31 216 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 BBS10Q8TAM1 723 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 TMEM80Q96HE8 168 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 CYP8B1Q9UNU6 501 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 SOX1O00570 391 aaPredicted RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 ENDOUP21128 410 aaKnown RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 ADAM17P78536 824 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF783Q6ZMS7 281 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 CTU1Q7Z7A3 348 aaKnown RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 CCDC120Q96HB5 630 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 OR2M4Q96R27 311 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 TIGARQ9NQ88 270 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 SLC2A6Q9UGQ3 507 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 FBLP22087 321 aaKnown RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 MLLT6P55198 1093 aaPredicted RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 DSG2Q14126 1118 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 RAB7BQ96AH8 199 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 POPDC3Q9HBV1 291 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 PTCHD3Q3KNS1 767 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 CDCA2Q69YH5 1023 aaPredicted RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 OR4K14Q8NGD5 310 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 OR5T2Q8NGG2 359 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 C10orf82Q8WW14 230 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 RNF39Q9H2S5 420 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 DKK3Q9UBP4 350 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 C3P01024 1663 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 CAPN5O15484 640 aaPredicted RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 IFI30P13284 250 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 HLA-EP13747 358 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 STC1P52823 247 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF267Q14586 743 aaPredicted RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 ZER1Q7Z7L7 766 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF611Q8N823 705 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 DENND6BQ8NEG7 585 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 MMABQ96EY8 250 aaPredicted RBP22.35■■□□□ 1.17
NPAS3-201ENST00000346562 PTTG2Q9NZH5 202 aa22.35■■□□□ 1.17
NPAS3-201ENST00000346562 UQCRC2P22695 453 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 MAGEA2P43356 314 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 PREPP48147 710 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 TSTQ16762 297 aaKnown RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 GRHL2Q6ISB3 625 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 SPATC1Q76KD6 591 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 ERN2Q76MJ5 926 aaKnown RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 CMASQ8NFW8 434 aaPredicted RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 TSSK6Q9BXA6 273 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 PLCL2Q9UPR0 1127 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 TMPRSS9Q7Z410 1059 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 POLDIP3Q9BY77 421 aaKnown RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 OR51B5Q9H339 312 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 HRASLS2Q9NWW9 162 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 GALPQ9UBC7 116 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 ZFR2Q9UPR6 939 aaKnown RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 EXOSC1Q9Y3B2 195 aaKnown RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 INMTO95050 263 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 GALNT2Q10471 571 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 TRAM2Q15035 370 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 C10orf62Q5T681 223 aaPredicted RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 ZC3HC1Q86WB0 502 aaKnown RBP22.34■■□□□ 1.17
NPAS3-201ENST00000346562 DMRTB1Q96MA1 342 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF700Q9H0M5 742 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 SALL4Q9UJQ4 1053 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 PADI2Q9Y2J8 665 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms