RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 H0Y8X5 98 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PI15O43692 258 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 STAMBPO95630 424 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SLC35G4P0C7Q5 338 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 GPR89BP0CG08 455 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ACADMP11310 421 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 POU3F3P20264 500 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SLC7A1P30825 629 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 S100A3P33764 101 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 AQP4P55087 323 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ZNF33BQ06732 778 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ACSM2AQ08AH3 577 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 TCEA2Q15560 299 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 MLF2Q15773 248 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 GRAMD1BQ3KR37 738 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PYCR3Q53H96 274 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ACSM2BQ68CK6 577 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 LCN8Q6JVE9 175 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PDSS2Q86YH6 399 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ANKRD13BQ86YJ7 626 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 C1orf52Q8N6N3 182 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 CANT1Q8WVQ1 401 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 LRTOMTQ8WZ04 291 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 DNASE1L2Q92874 299 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 C11orf24Q96F05 449 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 C12orf66Q96MD2 445 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 MENTQ9BUN1 341 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 C1QTNF7Q9BXJ2 289 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 BTBD1Q9H0C5 482 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SEMA6AQ9H2E6 1030 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 TRIT1Q9H3H1 467 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 BRF2Q9HAW0 419 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SERHLQ9NQF3 203 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ACTR10Q9NZ32 417 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ACTR3BQ9P1U1 418 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ACSL5Q9ULC5 683 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 FZD4Q9ULV1 537 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 NCKAP1Q9Y2A7 1128 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SH3GLB1Q9Y371 365 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 C15orf38-AP3S2A0A0A6YYH1 394 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PRAMEF33A0A0G2JMD5 474 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 TCRBV21S2A2A0A5A6 115 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 DPPA5A6NC42 116 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SAP18O00422 153 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 MBTPS2O43462 519 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 GSNP06396 782 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ERGP11308 486 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 HSD3B1P14060 373 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 HRH2P25021 359 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 HSD3B2P26439 372 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PSMB5P28074 263 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 CDKN2CP42773 168 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 TPMTP51580 245 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 DMPKQ09013 629 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 CLCA4Q14CN2 919 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 POU4F3Q15319 338 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 UGT8Q16880 541 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SPATS1Q496A3 300 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 TPRG1LQ5T0D9 272 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 OR4F3Q6IEY1 312 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ANKRD26P1Q6NSI1 321 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 USP30Q70CQ3 517 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ARPINQ7Z6K5 226 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PTRH1Q86Y79 214 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SYT12Q8IV01 421 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 LAS2Q8IYD9 372 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 GALNT6Q8NCL4 622 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 GALNT11Q8NCW6 608 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 FLCNQ8NFG4 579 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 OR7A2PQ8NGA2 310 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SETD7Q8WTS6 366 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 CHTF18Q8WVB6 975 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 DUS3LQ96G46 650 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 TIMM29Q9BSF4 260 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 EFCAB11Q9BUY7 163 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PAIP1Q9H074 479 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 FGF22Q9HCT0 170 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 DMRT3Q9NQL9 472 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 TAC3Q9UHF0 121 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SCML1Q9UN30 329 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 RUVBL1Q9Y265 456 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 SNX13Q9Y5W8 968 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 FANCMQ8IYD8 2048 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 AQP12BA6NM10 295 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 OR52A4PA6NMU1 304 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 CACNB4O00305 520 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-202ENST00000345734 TIPRLO75663 272 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 TGFB1P01137 390 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 RPN2P04844 631 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 GABRG2P18507 467 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 HTR1EP28566 365 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 OXTRP30559 389 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 CYP2A13Q16696 494 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 PAGE2BQ5JRK9 111 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 HMBOX1Q6NT76 420 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 LCTLQ6UWM7 567 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 PRR23BQ6ZRT6 265 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 AQP12AQ8IXF9 295 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 PEX5LQ8IYB4 626 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms