RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 C15orf39Q6ZRI6 1047 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 IQCHQ86VS3 1027 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 OR8J1Q8NGP2 316 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 FCAMRQ8WWV6 532 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 RHBDF1Q96CC6 855 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 MRPS33Q9Y291 106 aaKnown RBP17.49■□□□□ 0.39
SMC4-201ENST00000344722 ZNF451Q9Y4E5 1061 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 WRBO00258 174 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 SCGNO76038 276 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 GDI2P50395 445 aaKnown RBP17.49■□□□□ 0.39
SMC4-201ENST00000344722 NCBP2P52298 156 aaKnown RBP eCLIP17.49■□□□□ 0.396e-34■■■■■ 154.9
SMC4-201ENST00000344722 CRISP1P54107 249 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 ZNF155Q12901 538 aaPredicted RBP17.49■□□□□ 0.39
SMC4-201ENST00000344722 SLC25A25Q6KCM7 469 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 GDPGP1Q6ZNW5 385 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 PEX13Q92968 403 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 SCGB3A2Q96PL1 93 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 SLC30A3Q99726 388 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 ZNF471Q9BX82 626 aaPredicted RBP17.49■□□□□ 0.39
SMC4-201ENST00000344722 NSUN3Q9H649 340 aaKnown RBP17.49■□□□□ 0.39
SMC4-201ENST00000344722 LYARQ9NX58 379 aaKnown RBP17.49■□□□□ 0.39
SMC4-201ENST00000344722 PTGDR2Q9Y5Y4 395 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 GDF5P43026 501 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 FNTBP49356 437 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 MAN2A2P49641 1150 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 PLA2G4EQ3MJ16 856 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 MTG2Q9H4K7 406 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 GPR83Q9NYM4 423 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 SLC22A14Q9Y267 594 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 ADM5C9JUS6 153 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 FAAHO00519 579 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 PPIGQ13427 754 aaKnown RBP eCLIP17.49■□□□□ 0.392e-7■■■■■ 57.4
SMC4-201ENST00000344722 FAM109AQ8N4B1 249 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 OSTF1Q92882 214 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 TTC24A2A3L6 582 aaPredicted RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 RFPL3O75679 317 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 ZNF252P-AS1Q0IIN9 211 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 SPCS2Q15005 226 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 GRK1Q15835 563 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 REEP3Q6NUK4 255 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 HSDL2Q6YN16 418 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 CHDHQ8NE62 594 aaPredicted RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 RHOXF1Q8NHV9 184 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 ZBTB20Q9HC78 741 aaPredicted RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 CHMP1AQ9HD42 196 aaPredicted RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 WDR6Q9NNW5 1121 aaKnown RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 FBXW2Q9UKT8 454 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 NOP16Q9Y3C1 178 aaKnown RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 B8ZZF3 427 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 C1QTNF8P60827 252 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 LRP8Q14114 963 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 SLBPQ14493 270 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMC4-201ENST00000344722 RHEBQ15382 184 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 GNPDA2Q8TDQ7 276 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 OR51I1Q9H343 314 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 IMP3Q9NV31 184 aaKnown RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 SIX4Q9UIU6 781 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 SAP18O00422 153 aaKnown RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 IL3P08700 152 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 GIMD1P0DJR0 217 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 HOXD8P13378 290 aaPredicted RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 FSHRP23945 695 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 GINS1Q14691 196 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 ZNF227Q86WZ6 799 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 NUDT13Q86X67 352 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 ZNF676Q8N7Q3 588 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 FRS2Q8WU20 508 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 TMEM125Q96AQ2 219 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 NEUROD4Q9HD90 331 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 NPAP1Q9NZP6 1156 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 LYRM1O43325 122 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 POP4O95707 220 aaKnown RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 PLATP00750 562 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 LCKP06239 509 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 CAPN3P20807 821 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 NT5EP21589 574 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 FAM198BQ6UWH4 519 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 LBX2Q6XYB7 198 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 OR6K6Q8NGW6 343 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 RHCGQ9UBD6 479 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 RIMBP3CA6NJZ7 1639 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 RIMBP3BA6NNM3 1639 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 RIMBP3Q9UFD9 1639 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 CELP19835 753 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 PDHA2P29803 388 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 RORAP35398 523 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 OR1E2P47887 323 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 SF1Q15637 639 aaKnown RBP17.48■□□□□ 0.39
SMC4-201ENST00000344722 CXCL17Q6UXB2 119 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 SCAMP5Q8TAC9 235 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 FIZ1Q96SL8 496 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 MGAT4CQ9UBM8 478 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 HS3ST4Q9Y661 456 aa17.48■□□□□ 0.39
SMC4-201ENST00000344722 TLL1O43897 1013 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 GRK6P43250 576 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 NRIP1P48552 1158 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 EIF4HQ15056 248 aaKnown RBP17.47■□□□□ 0.39
SMC4-201ENST00000344722 SIMC1Q8NDZ2 872 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms