RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CTNNAL1Q9UBT7 734 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 CACNA1DQ01668 2161 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 ZG16O60844 167 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 H2AFYO75367 372 aaKnown RBP11.7□□□□□ -0.54
SGCA-202ENST00000344627 PIAS1O75925 651 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 WDPCPO95876 746 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 B3GALT4O96024 378 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 CA7P43166 264 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 EFNA3P52797 238 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 TAS2R39P59534 338 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 OLR1P78380 273 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 PWP1Q13610 501 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 FRG1Q14331 258 aaKnown RBP11.7□□□□□ -0.54
SGCA-202ENST00000344627 ABRAXAS2Q15018 415 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 NSDHLQ15738 373 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 ZXDCQ2QGD7 858 aaPredicted RBP11.7□□□□□ -0.54
SGCA-202ENST00000344627 DEFB134Q4QY38 66 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 FCRLBQ6BAA4 426 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 SBSNQ6UWP8 590 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 BNC2Q6ZN30 1099 aaPredicted RBP11.7□□□□□ -0.54
SGCA-202ENST00000344627 ABHD13Q7L211 337 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 MAATS1Q7Z4T9 603 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 ANKRD37Q7Z713 158 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 FJX1Q86VR8 437 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 PDSS2Q86YH6 399 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 CYP4X1Q8N118 509 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 LGI4Q8N135 537 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 OR4K1Q8NGD4 311 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 OR5T3Q8NGG3 340 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 THAP3Q8WTV1 239 aaPredicted RBP11.7□□□□□ -0.54
SGCA-202ENST00000344627 PDLIM5Q96HC4 596 aaKnown RBP11.7□□□□□ -0.54
SGCA-202ENST00000344627 IMMP1LQ96LU5 166 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 AIF1LQ9BQI0 150 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 UNKQ9C0B0 810 aaKnown RBP11.7□□□□□ -0.54
SGCA-202ENST00000344627 RHBGQ9H310 441 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 SEC14L3Q9UDX4 400 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 SLC22A14Q9Y267 594 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 SLC22A7Q9Y694 548 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 KCNE2Q9Y6J6 123 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 CREBBPQ92793 2442 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 CPAMD8Q8IZJ3 1885 aa11.7□□□□□ -0.54
SGCA-202ENST00000344627 MYO7BQ6PIF6 2116 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 URADA6NGE7 173 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 NCF1BA6NI72 391 aaPredicted RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 NCF1CA8MVU1 366 aaPredicted RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 B4GALT2O60909 372 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 WDR47O94967 919 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 ZNF888P0CJ79 500 aaPredicted RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 NCF1P14598 390 aaPredicted RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 ZNF37AP17032 561 aaPredicted RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 ALOX12P18054 663 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 CASQ1P31415 396 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 SMSP52788 366 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 OR4D2P58180 307 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 RAB8AP61006 207 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 TSNQ15631 228 aaKnown RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 SFT2D3Q587I9 215 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 H3F3CQ6NXT2 135 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 NXPE4Q6UWF7 544 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 GDF7Q7Z4P5 450 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 FAM98AQ8NCA5 519 aaKnown RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 M1APQ8TC57 530 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 CCT6BQ92526 530 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 CDKL2Q92772 493 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 RHOJQ9H4E5 214 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 CLK4Q9HAZ1 481 aaKnown RBP11.69□□□□□ -0.54
SGCA-202ENST00000344627 GPAMQ9HCL2 828 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 MOCS1Q9NZB8 636 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 ZFP69BQ9UJL9 534 aa11.69□□□□□ -0.54
SGCA-202ENST00000344627 TRGV8A0A0C4DH27 118 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 E7ESA3 106 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 PSMD12O00232 456 aaPredicted RBP11.68□□□□□ -0.54
SGCA-202ENST00000344627 CHST10O43529 356 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 GALR3O60755 368 aaPredicted RBP11.68□□□□□ -0.54
SGCA-202ENST00000344627 FHP07954 510 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 SSTR1P30872 391 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 AHRP35869 848 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 SCTRP47872 440 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 HNMTP50135 292 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 ST13P50502 369 aaKnown RBP11.68□□□□□ -0.54
SGCA-202ENST00000344627 C2orf54Q08AI8 447 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 USP10Q14694 798 aaKnown RBP11.68□□□□□ -0.54
SGCA-202ENST00000344627 MEP1AQ16819 746 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 ZNF630Q2M218 657 aaPredicted RBP11.68□□□□□ -0.54
SGCA-202ENST00000344627 TOR1AIP1Q5JTV8 583 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 PAPD4Q6PIY7 484 aaKnown RBP11.68□□□□□ -0.54
SGCA-202ENST00000344627 ADAMTSL2Q86TH1 951 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 CCDC25Q86WR0 208 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 CEP97Q8IW35 865 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 MCEMP1Q8IX19 187 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 TMEM178AQ8NBL3 297 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 TRPV3Q8NET8 790 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 NT5CQ8TCD5 201 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 ANKRD49Q8WVL7 239 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 TSLPQ969D9 159 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 TBC1D20Q96BZ9 403 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms