RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZNF438Q7Z4V0 828 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 EFCAB3Q8N7B9 438 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 FAM13CQ8NE31 585 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 CREB3L4Q8TEY5 395 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 RERGQ96A58 199 aaPredicted RBP16.56■□□□□ 0.24
CLDN4-201ENST00000340958 MACROD1Q9BQ69 325 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 RMND5AQ9H871 391 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 IL21RQ9HBE5 538 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 SPAG4Q9NPE6 437 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 MCM8Q9UJA3 840 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 PCDHGA4Q9Y5G9 962 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 LILRA5A6NI73 299 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 RTCAO00442 366 aaKnown RBP16.56■□□□□ 0.24
CLDN4-201ENST00000340958 PLPP1O14494 284 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 TNFSF14O43557 240 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 PRMT3O60678 531 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 PVRP15151 417 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 TGM1P22735 817 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 MPLP40238 635 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 SSR2P43308 183 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 STXBP1P61764 594 aaKnown RBP16.56■□□□□ 0.24
CLDN4-201ENST00000340958 RGS1Q08116 209 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 TOR1AIP1Q5JTV8 583 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 PRMT9Q6P2P2 845 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 GPR180Q86V85 440 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 NUDT13Q86X67 352 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 FBXW8Q8N3Y1 598 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 CCDC124Q96CT7 223 aaKnown RBP16.56■□□□□ 0.24
CLDN4-201ENST00000340958 FCRL4Q96PJ5 515 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 HOPXQ9BPY8 73 aaPredicted RBP16.56■□□□□ 0.24
CLDN4-201ENST00000340958 SORBS1Q9BX66 1292 aaKnown RBP16.56■□□□□ 0.24
CLDN4-201ENST00000340958 SMOC1Q9H4F8 434 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 SIRT5Q9NXA8 310 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 MAP10Q9P2G4 905 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 A0A088AWK7 358 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 OR2A25A4D2G3 310 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 LRIT2A6NDA9 550 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 SLC35G6P0C7Q6 338 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 EPHA8P29322 1005 aaPredicted RBP16.55■□□□□ 0.24
CLDN4-201ENST00000340958 HOXD12P35452 270 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 KIR3DL1P43629 444 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 CAPZBP47756 277 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 MAPK12P53778 367 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 PPP1CAP62136 330 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 TGM3Q08188 693 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 CAPRIN1Q14444 709 aaKnown RBP16.55■□□□□ 0.24
CLDN4-201ENST00000340958 TLR1Q15399 786 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 DPY19L1Q2PZI1 675 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 PAGE3Q5JUK9 113 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 C1orf146Q5VVC0 180 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 ASPGQ86U10 573 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 GATAD2AQ86YP4 633 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 BAHD1Q8TBE0 780 aaPredicted RBP16.55■□□□□ 0.24
CLDN4-201ENST00000340958 TESCQ96BS2 214 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 LRRC58Q96CX6 371 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 C11orf24Q96F05 449 aaPredicted RBP16.55■□□□□ 0.24
CLDN4-201ENST00000340958 PPM1MQ96MI6 270 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 C17orf62Q9BQA9 187 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 SLC39A3Q9BRY0 314 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 SARGQ9BW04 601 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 GAREM1Q9H706 876 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 SLC52A3Q9NQ40 469 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 POMT2Q9UKY4 750 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 PCDHGA7Q9Y5G6 932 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 PCDHGA5Q9Y5G8 931 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 RNF215Q9Y6U7 377 aa16.55■□□□□ 0.24
CLDN4-201ENST00000340958 A0A1B0GTQ1 180 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 A8MUI8 341 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 CAPN5O15484 640 aaPredicted RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 ERI3O43414 337 aaKnown RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 DFNA5O60443 496 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 KCNH1O95259 989 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 EIF2S1P05198 315 aaKnown RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 GTF2A1P52655 376 aaPredicted RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 TAS2R50P59544 299 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SRSF11Q05519 484 aaKnown RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 C2orf80Q0P641 193 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 TRMT5Q32P41 509 aaKnown RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 TRIM61Q5EBN2 209 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 PLA2G2CQ5R387 149 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 CPTPQ5TA50 214 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 FCRL6Q6DN72 434 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 OR4C11Q6IEV9 310 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 FBXO42Q6P3S6 717 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 TRIM40Q6P9F5 258 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 CYB5D1Q6P9G0 228 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 DHDDSQ86SQ9 333 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 C17orf82Q86X59 251 aaPredicted RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SRFBP1Q8NEF9 429 aaKnown RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 C16orf78Q8WTQ4 265 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 NCSTNQ92542 709 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 ZFYVE21Q9BQ24 234 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 CCDC3Q9BQI4 270 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 DUSP23Q9BVJ7 150 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SEMA6CQ9H3T2 930 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SEMA4GQ9NTN9 838 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SH3BP4Q9P0V3 963 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 PACSIN3Q9UKS6 424 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 L3MBTL1Q9Y468 752 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 A0A0G2JN53 185 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms