RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TMEM35BQ8NCS4 154 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 PSD4Q8NDX1 1056 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 DDHD1Q8NEL9 900 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 HSPBAP1Q96EW2 488 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 PAGE5Q96GU1 130 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 ZC3HAV1LQ96H79 300 aaKnown RBP10.2□□□□□ -0.78
ATXN3-201ENST00000340660 HS6ST2Q96MM7 605 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 SPATA13Q96N96 652 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 RBM4Q9BWF3 364 aaKnown RBP10.2□□□□□ -0.78
ATXN3-201ENST00000340660 EXO5Q9H790 373 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 MAGED1Q9Y5V3 778 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-201ENST00000340660 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-201ENST00000340660 MBD3L3A6NE82 208 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-201ENST00000340660 AHRRA9YTQ3 701 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 EEF2KO00418 725 aaKnown RBP10.19□□□□□ -0.78
ATXN3-201ENST00000340660 SGTAO43765 313 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 UGT1A9O60656 530 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 DANCRP0C864 163 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 UGT1A6P19224 532 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 CPOXP36551 454 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 ITKQ08881 620 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 KIR2DS3Q14952 304 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 SLC10A1Q14973 349 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 MLANAQ16655 118 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 SFT2D3Q587I9 215 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 MBD3L2Q8NHZ7 208 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-201ENST00000340660 ANKRD9Q96BM1 317 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-201ENST00000340660 MMABQ96EY8 250 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-201ENST00000340660 SCYL1Q96KG9 808 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 UGT1A7Q9HAW7 530 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 UGT1A10Q9HAW8 530 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 UGT1A8Q9HAW9 530 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 BARX1Q9HBU1 254 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-201ENST00000340660 FAM53CQ9NYF3 392 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 OR6C2Q9NZP2 312 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 KCMF1Q9P0J7 381 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 DUSP10Q9Y6W6 482 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 ALPK2Q86TB3 2170 aa10.19□□□□□ -0.78
ATXN3-201ENST00000340660 A8MXE2 369 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 TRIM77I1YAP6 450 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 FCHO1O14526 889 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 KPNA5O15131 536 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 P4HA2O15460 535 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 PRPF4O43172 522 aaKnown RBP eCLIP10.18□□□□□ -0.78
ATXN3-201ENST00000340660 NRP2O60462 931 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 SRPX2O60687 465 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-201ENST00000340660 EIF2S1P05198 315 aaKnown RBP10.18□□□□□ -0.78
ATXN3-201ENST00000340660 SLC25A16P16260 332 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 PDHA2P29803 388 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 GDNFP39905 211 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 CCR8P51685 355 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 COL10A1Q03692 680 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 NIPAL4Q0D2K0 466 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 MINDY4Q4G0A6 757 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 LDLRAP1Q5SW96 308 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 RFX8Q6ZV50 586 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 SLC26A11Q86WA9 606 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 TEX26Q8N6G2 289 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 LMNTD1Q8N9Z9 388 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 C9orf106Q8NAJ2 232 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 OR5AR1Q8NGP9 310 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 ARRDC2Q8TBH0 407 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 ENOX1Q8TC92 643 aaKnown RBP10.18□□□□□ -0.78
ATXN3-201ENST00000340660 AKAP1Q92667 903 aaKnown RBP eCLIP10.18□□□□□ -0.78
ATXN3-201ENST00000340660 UBE2FQ969M7 185 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 FAF2Q96CS3 445 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 CABS1Q96KC9 395 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 LINC00615Q96LM1 132 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-201ENST00000340660 POLR1EQ9GZS1 481 aaKnown RBP10.18□□□□□ -0.78
ATXN3-201ENST00000340660 IL1RL2Q9HB29 575 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 BPIFA1Q9NP55 256 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 PLAGL1Q9UM63 463 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 CDC14AQ9UNH5 594 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 ZNF711Q9Y462 761 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 PTGDR2Q9Y5Y4 395 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
ATXN3-201ENST00000340660 EPHB6O15197 1021 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 KLF4O43474 513 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 FOXS1O43638 330 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 CYC1P08574 325 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 LGALS3BPQ08380 585 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 CETN1Q12798 172 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 LONRF2Q1L5Z9 754 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 TYSND1Q2T9J0 566 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 TSNAXIP1Q2TAA8 658 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 PRTGQ2VWP7 1150 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 MFSD4BQ5TF39 518 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 MILR1Q7Z6M3 343 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 HM13Q8TCT9 377 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 MVB12AQ96EY5 273 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 KIRREL1Q96J84 757 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 DOCK7Q96N67 2140 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 LPAR4Q99677 370 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 TMEM204Q9BSN7 226 aa10.17□□□□□ -0.78
ATXN3-201ENST00000340660 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.17□□□□□ -0.78
ATXN3-201ENST00000340660 KLHL33A6NCF5 533 aa10.16□□□□□ -0.78
ATXN3-201ENST00000340660 IFRD1O00458 451 aaPredicted RBP10.16□□□□□ -0.78
ATXN3-201ENST00000340660 AURKAO14965 403 aa10.16□□□□□ -0.78
ATXN3-201ENST00000340660 CCP110O43303 1012 aa10.16□□□□□ -0.78
ATXN3-201ENST00000340660 ANXA5P08758 320 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms