RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 GFRA2O00451 464 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 NCF1P14598 390 aaPredicted RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 ATF6P18850 670 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 SSTR4P31391 388 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 HTR6P50406 440 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 ARSDP51689 593 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 RRAS2P62070 204 aaPredicted RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 MED22Q15528 200 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 RUNDC3AQ59EK9 446 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 TOR1AIP1Q5JTV8 583 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 RANBP10Q6VN20 620 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 TIGD4Q8IY51 512 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 RTL3Q8N8U3 475 aaKnown RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 ANKRD53Q8N9V6 530 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 IGSF21Q96ID5 467 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 HYLS1Q96M11 299 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 CDK15Q96Q40 435 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 VN1R3Q9BXE9 311 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 EXOSC4Q9NPD3 245 aaKnown RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 IL1RAPQ9NPH3 570 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 SNTG1Q9NSN8 517 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 CMAHPQ9Y471 501 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 CLCA3PQ9Y6N3 262 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 GBF1Q92538 1859 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 RFPL3O75679 317 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 EFEMP2O95967 443 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 HMBSP08397 361 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 CLCN7P51798 805 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 BTN1A1Q13410 526 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 LARS2Q15031 903 aaKnown RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 MS4A13Q5J8X5 152 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 SPOUT1Q5T280 376 aaKnown RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 MLIPQ5VWP3 458 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 ABI3BPQ7Z7G0 1075 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 GPAT4Q86UL3 456 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 FAM217AQ8IXS0 508 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 EFHBQ8N7U6 833 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 HERVK_113Q902F9 699 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 ZNF578Q96N58 590 aaPredicted RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 MGLLQ99685 303 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 GALNT9Q9HCQ5 603 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 C1orf109Q9NX04 203 aa14.8□□□□□ -0.04
LIMK2-203ENST00000340552 SAMHD1Q9Y3Z3 626 aaKnown RBP14.8□□□□□ -0.04
LIMK2-203ENST00000340552 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 RPS10-NUDT3A0A1W2PQS6 291 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 SLC38A8A6NNN8 435 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 MYL12BO14950 172 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 PER2O15055 1255 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 MAFKO60675 156 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 PDE9AO76083 593 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 MYL12AP19105 171 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 PTGR1Q14914 329 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 MAPKAPK3Q16644 382 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 FAM174BQ3ZCQ3 159 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 TIMM50Q3ZCQ8 353 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ZSWIM9Q86XI8 627 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 GIMAP5Q96F15 307 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 GFM1Q96RP9 751 aaKnown RBP14.79□□□□□ -0.04
LIMK2-203ENST00000340552 MIXL1Q9H2W2 232 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 TFB2MQ9H5Q4 396 aaKnown RBP14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ABCB9Q9NP78 766 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 RNF112Q9ULX5 631 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 NYNRINQ9P2P1 1898 aaKnown RBP14.79□□□□□ -0.04
LIMK2-203ENST00000340552 KIAA0100Q14667 2235 aaKnown RBP14.79□□□□□ -0.04
LIMK2-203ENST00000340552 IFRD1O00458 451 aaPredicted RBP14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ECI2O75521 394 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 IFNA16P05015 189 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 GZMMP51124 257 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 GEMP55040 296 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 VLDLRP98155 873 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 IKZF1Q13422 519 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 KCNC3Q14003 757 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 PDZK1Q5T2W1 519 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 FAHD1Q6P587 224 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 TMCO2Q7Z6W1 182 aaPredicted RBP14.79□□□□□ -0.04
LIMK2-203ENST00000340552 CLHC1Q8NHS4 586 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 BTN2A2Q8WVV5 523 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 RIT1Q92963 219 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 PCTPQ9UKL6 214 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ASB1Q9Y576 335 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ANKRD36A6QL64 1941 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 FAM220BPB1ANY3 271 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 TLR5O60602 858 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 KERAO60938 352 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 MAP2K6P52564 334 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 RFTN2Q52LD8 501 aaPredicted RBP14.79□□□□□ -0.04
LIMK2-203ENST00000340552 OR4F3Q6IEY1 312 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ANKRD54Q6NXT1 300 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ZNF367Q7RTV3 350 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 CALHM3Q86XJ0 350 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 KRT73Q86Y46 540 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 GPALPP1Q8IXQ4 340 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 ZNF683Q8IZ20 524 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 OR52H1Q8NGJ2 320 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 UPRTQ96BW1 309 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 KLHL15Q96M94 604 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 BACE2Q9Y5Z0 518 aa14.79□□□□□ -0.04
LIMK2-203ENST00000340552 WASH4PA8MWX3 477 aa14.78□□□□□ -0.04
LIMK2-203ENST00000340552 MATN3O15232 486 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms