RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 VPS26AO75436 327 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 GATBO75879 557 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 AKR7A3O95154 331 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 PRAMEF1O95521 474 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 C4BPAP04003 597 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 SMPD1P17405 629 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 EFNA1P20827 205 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 INPP1P49441 399 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 STAT5BP51692 787 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 PGDP52209 483 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 LIMK1P53667 647 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 EEFSECP57772 596 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 DCDC1P59894 354 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 SH3BP2P78314 561 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ELP6Q0PNE2 266 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ST3GAL4Q11206 333 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 SNTB1Q13884 538 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 IRF4Q15306 451 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 TARBP2Q15633 366 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 APOBEC3HQ6NTF7 200 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 MSANTD2Q6P1R3 559 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 C15orf39Q6ZRI6 1047 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 BTN2A1Q7KYR7 527 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 RNF130Q86XS8 419 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 SIAH1Q8IUQ4 282 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 GHDCQ8N2G8 530 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 TADA1Q96BN2 335 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 MRPL57Q9BQC6 102 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 OR51M1Q9H341 326 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 GSTO2Q9H4Y5 243 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 C8orf33Q9H7E9 229 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 C3orf14Q9HBI5 128 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 GLOD4Q9HC38 313 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ABCC13Q9NSE7 274 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 PDP1Q9P0J1 537 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 MYEF2Q9P2K5 600 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 CPA4Q9UI42 421 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 CNTN6Q9UQ52 1028 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 UBR3Q6ZT12 1888 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 A0A075B6Q4 140 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 A0A1B0GVC2 190 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 A6NIN4 97 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 PRKAR1AP10644 381 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ANXA3P12429 323 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 PTPRAP18433 802 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 GGT1P19440 569 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 MAPK1P28482 360 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 MMP12P39900 470 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 STARP49675 285 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 TKTL1P51854 596 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 HUNKP57058 714 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 RNASE12Q5GAN4 147 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 SPANXN3Q5MJ09 141 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 MARCH8Q5T0T0 291 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 FCRLBQ6BAA4 426 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ZCCHC12Q6PEW1 402 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 HAGHLQ6PII5 290 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM179Q6ZVK1 233 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 SSX9Q7RTT3 188 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR142Q7Z601 462 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ZER1Q7Z7L7 766 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 LUZP2Q86TE4 346 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ATCAYQ86WG3 371 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 CHPFQ8IZ52 775 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 RYBPQ8N488 228 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 CCNYQ8ND76 341 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 UBA3Q8TBC4 463 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 HTR3CQ8WXA8 447 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 KLRG1Q96E93 195 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR22Q99680 433 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 MID1IP1Q9NPA3 183 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 ERAP1Q9NZ08 941 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 SH3BP4Q9P0V3 963 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 PIAS3Q9Y6X2 628 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 DDX60LQ5H9U9 1706 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 NUP98P52948 1817 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 FAM95CA0A1B0GW59 222 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 OR6C75A6NL08 312 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 ANXA2P2A6NMY6 339 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 PRSS47A8MTI9 375 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 GFRA2O00451 464 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 BRINP1O60477 761 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SEC22BO75396 215 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 PRF1P14222 555 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 UBA1P22314 1058 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 ZFP36L2P47974 494 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 AKR1C2P52895 323 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 RNF4P78317 190 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 MC2RQ01718 297 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 AKR1C1Q04828 323 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 RBBP4Q09028 425 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 RAB33AQ14088 237 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 IL18Q14116 193 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 CHRNA6Q15825 494 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 NHLRC3Q5JS37 347 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 DLEU7Q6UYE1 221 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms