RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 PCDHGB3Q9Y5G1 929 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 EFCAB9A8MZ26 197 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 IMPA1P29218 277 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 C21orf58P58505 322 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 CYP27C1Q4G0S4 372 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 ZNF385BQ569K4 471 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 MINDY2Q8NBR6 621 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 SORCS1Q8WY21 1168 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 TMEM159Q96B96 161 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 ZHX1-C8orf76Q96EF9 292 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 EXO1Q9UQ84 846 aaKnown RBP17.13■□□□□ 0.33
IFFO1-201ENST00000336604 LYVE1Q9Y5Y7 322 aa17.13■□□□□ 0.33
IFFO1-201ENST00000336604 DOCK6Q96HP0 2047 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 TTC34A8MYJ7 566 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 LEFTY1O75610 366 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 CTSAP10619 480 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 ETFAP13804 333 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 PDHA2P29803 388 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 HNF4AP41235 474 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 RPS13P62277 151 aaKnown RBP17.12■□□□□ 0.33
IFFO1-201ENST00000336604 LINC00299Q6ZSB3 139 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 AKAP14Q86UN6 197 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 PLD3Q8IV08 490 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 C11orf65Q8NCR3 313 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 PHF10Q8WUB8 498 aaKnown RBP17.12■□□□□ 0.33
IFFO1-201ENST00000336604 IPCEF1Q8WWN9 437 aaPredicted RBP17.12■□□□□ 0.33
IFFO1-201ENST00000336604 NEIL2Q969S2 332 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 DACH2Q96NX9 599 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 GABARAPL3Q9BY60 117 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 MTG2Q9H4K7 406 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 BTNL2Q9UIR0 455 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 PADI2Q9Y2J8 665 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 E9PQ18 207 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 HLA-EP13747 358 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 PBLDP30039 288 aaPredicted RBP17.12■□□□□ 0.33
IFFO1-201ENST00000336604 NUDT6P53370 316 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 HBA1P69905 142 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 TSTA3Q13630 321 aaPredicted RBP17.12■□□□□ 0.33
IFFO1-201ENST00000336604 VASH1Q7L8A9 365 aaPredicted RBP17.12■□□□□ 0.33
IFFO1-201ENST00000336604 OTOP2Q7RTS6 562 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 CCDC103Q8IW40 242 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 SLC5A8Q8N695 610 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 RASGEF1AQ8N9B8 481 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 SPG21Q9NZD8 308 aa17.12■□□□□ 0.33
IFFO1-201ENST00000336604 TNFRSF11BO00300 401 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 RFPL2O75678 378 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 LRG1P02750 347 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 ASMTP46597 345 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 IDH2P48735 452 aaKnown RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 MVDP53602 400 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 IFITM2Q01629 132 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 ZNF33BQ06732 778 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 FOXD4Q12950 439 aaPredicted RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■□□ 16.2
IFFO1-201ENST00000336604 HENMT1Q5T8I9 393 aaKnown RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 UBE2UQ5VVX9 321 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 DDX53Q86TM3 631 aaKnown RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 CHTF18Q8WVB6 975 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 PKP4Q99569 1192 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 ITPAQ9BY32 194 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 BRF2Q9HAW0 419 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 C5orf42Q9H799 3197 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 SAP18O00422 153 aaKnown RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 DLGAP3O95886 979 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 ZNF30P17039 623 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 PCGF2P35227 344 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 GRK3P35626 688 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 CCR2P41597 374 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 CLK1P49759 484 aaKnown RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 SELENOWP63302 87 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 ARMC8Q8IUR7 673 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 TMEM121BQ9BXQ6 578 aaPredicted RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 CEP44Q9C0F1 390 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 DSN1Q9H410 356 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 OSGIN1Q9UJX0 560 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 ACSL6Q9UKU0 697 aa17.11■□□□□ 0.33
IFFO1-201ENST00000336604 TMA7Q9Y2S6 64 aaKnown RBP17.11■□□□□ 0.33
IFFO1-201ENST00000336604 NPC1O15118 1278 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 CATP04040 527 aaKnown RBP17.1■□□□□ 0.33
IFFO1-201ENST00000336604 VIPR1P32241 457 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 SLC19A1P41440 591 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 RECQLP46063 649 aaPredicted RBP17.1■□□□□ 0.33
IFFO1-201ENST00000336604 MC1RQ01726 317 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 NOGQ13253 232 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 ARSIQ5FYB1 569 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 TMEM215Q68D42 235 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 BRAT1Q6PJG6 821 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 CYB5D2Q8WUJ1 264 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 ATL1Q8WXF7 558 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 COQ8BQ96D53 544 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 VWCEQ96DN2 955 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 DCSTAMPQ9H295 470 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 TP63Q9H3D4 680 aaPredicted RBP17.1■□□□□ 0.33
IFFO1-201ENST00000336604 RAD18Q9NS91 495 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 CDH23Q9H251 3354 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 PRAMEF25A6NGN4 478 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 CLDN24A6NM45 220 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 M0R129 80 aa17.1■□□□□ 0.33
IFFO1-201ENST00000336604 SNPHO15079 494 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms