RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TSC22D2O75157 780 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 CLTBP09497 229 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 CYP2A7P20853 494 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 AOAHP28039 575 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 MAPK8P45983 427 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 CASP9P55211 416 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 STK11Q15831 433 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 USP39Q53GS9 565 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 OR4F3Q6IEY1 312 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 ZNF540Q8NDQ6 660 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 SIMC1Q8NDZ2 872 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 UBASH3BQ8TF42 649 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 PCNPQ8WW12 178 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 PAWRQ96IZ0 340 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 KCNS3Q9BQ31 491 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 RIOK2Q9BVS4 552 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 CFHR5Q9BXR6 569 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 ATP13A2Q9NQ11 1180 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 MAGEL2Q9UJ55 1249 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 DNMT3AQ9Y6K1 912 aaPredicted RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 SCN8AQ9UQD0 1980 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 SMLR1H3BR10 107 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 SLC28A1O00337 649 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 OR56A5P0C7T3 313 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 LIPAP38571 399 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 MESP2Q0VG99 397 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 IRAK1BP1Q5VVH5 260 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 AHSA2Q719I0 299 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 B3GNT8Q7Z7M8 397 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 PROSER1Q86XN7 944 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 RIMKLAQ8IXN7 391 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 ZNF548Q8NEK5 533 aaPredicted RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 NETO1Q8TDF5 533 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 WRAP53Q9BUR4 548 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 NTMT1Q9BV86 223 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 RIBC2Q9H4K1 309 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 KAT8Q9H7Z6 458 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 HS3ST2Q9Y278 367 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 BTBD3Q9Y2F9 522 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 ARNTLO00327 626 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 PLK4O00444 970 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 DIRAS1O95057 198 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 POP4O95707 220 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 KRT6AP02538 564 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 KRT6BP04259 564 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 ATP1B2P14415 290 aaPredicted RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 PRKACAP17612 351 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 GADD45AP24522 165 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 RPS14P62263 151 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 FCHO2Q0JRZ9 810 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 CHIT1Q13231 466 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 FAM98BQ52LJ0 330 aaKnown RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 GDPD4Q6W3E5 623 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 ZNF517Q6ZMY9 492 aaPredicted RBP13.38□□□□□ -0.27
SF1-202ENST00000334944 CPXM2Q8N436 756 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 TRIM63Q969Q1 353 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 ECHDC3Q96DC8 303 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 LMLNQ96KR4 655 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 CLMPQ9H6B4 373 aa13.38□□□□□ -0.27
SF1-202ENST00000334944 NOTCH4Q99466 2003 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 ABHD14A-ACY1A0A1B0GW23 586 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 ANTXRLA6NF34 631 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 METTL15A6NJ78 407 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 CXCR6O00574 342 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 CTDSP2O14595 271 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 CTSAP10619 480 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 PFKLP17858 780 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 SDC1P18827 310 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 S100A5P33763 92 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 RECQLP46063 649 aaPredicted RBP13.37□□□□□ -0.27
SF1-202ENST00000334944 CTSCP53634 463 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 FOXD4Q12950 439 aaPredicted RBP13.37□□□□□ -0.27
SF1-202ENST00000334944 DUSP7Q16829 419 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 YIF1BQ5BJH7 314 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 TRIM46Q7Z4K8 759 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 ADIPOR2Q86V24 386 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 ANGPTL6Q8NI99 470 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 ASB11Q8WXH4 323 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 OR6C70A6NIJ9 312 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 FADS2P1A8MWK0 482 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 B8ZZF3 427 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 DSCR3O14972 297 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 GRM6O15303 877 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 AIREO43918 545 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 FKBP9O95302 570 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 SERPINA1P01009 418 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 NTRK1P04629 796 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 EPHA2P29317 976 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 S100A3P33764 101 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 GRK5P34947 590 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 MPP7Q5T2T1 576 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 ZNF551Q7Z340 670 aaPredicted RBP13.37□□□□□ -0.27
SF1-202ENST00000334944 NOXA1Q86UR1 476 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 NLRP8Q86W28 1048 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 CBARPQ8N350 705 aaPredicted RBP13.37□□□□□ -0.27
SF1-202ENST00000334944 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
SF1-202ENST00000334944 USP7Q93009 1102 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms