RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 NTMT1Q9BV86 223 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 TPT1P8Q9HAU6 139 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 COQ3Q9NZJ6 369 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 FZD4Q9ULV1 537 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 SNX7Q9UNH6 387 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 DNAH14Q0VDD8 3507 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 MEN1O00255 615 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ANXA5P08758 320 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CKMT1AP12532 417 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 IFI30P13284 250 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CD9P21926 228 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 MYL9P24844 172 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 SOX3P41225 446 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 Q5BKY6 102 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 NADSYN1Q6IA69 706 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 PTCHD4Q6ZW05 846 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CHCHD4Q8N4Q1 142 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 USP7Q93009 1102 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 P2RY12Q9H244 342 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ZNF226Q9NYT6 803 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ZFP37Q9Y6Q3 630 aaPredicted RBP13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ADAMDEC1O15204 470 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CHRM5P08912 532 aaPredicted RBP13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ALPIP09923 528 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CKBP12277 381 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ETV6P41212 452 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 RORCP51449 518 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CDC42P60953 191 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 PXDC1Q5TGL8 231 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 FAM124AQ86V42 546 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 SLC34A3Q8N130 599 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 OR9Q2Q8NGE9 314 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ENKURQ8TC29 256 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 COQ8BQ96D53 544 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 DEFB118Q96PH6 123 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 MCCC1Q96RQ3 725 aaPredicted RBP13.23□□□□□ -0.29
SYNE3-201ENST00000334258 COPS8Q99627 209 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 MAGEH1Q9H213 219 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ASIC5Q9NY37 505 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 SLC6A14Q9UN76 642 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 KCNJ13O60928 360 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 PRAMEF12O95522 483 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 RPIAP49247 311 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 TUSC3Q13454 348 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 NOXRED1Q6NXP6 359 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 ZBTB2Q8N680 514 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 DENND6BQ8NEG7 585 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 SNAPC3Q92966 411 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 TESCQ96BS2 214 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 OMA1Q96E52 524 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 C7orf34Q96L11 122 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 IL4I1Q96RQ9 567 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CCSER2Q9H7U1 834 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 CRLS1Q9UJA2 301 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 PRSS21Q9Y6M0 314 aa13.23□□□□□ -0.29
SYNE3-201ENST00000334258 M0QZQ0 153 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 ERVH48-1M5A8F1 160 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 RHOCP08134 193 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 CCNYL3P0C7X3 344 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 ANXA8P13928 327 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 GPX2P18283 190 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 SNRPD2P62316 118 aaKnown RBP13.22□□□□□ -0.29
SYNE3-201ENST00000334258 EIF4HQ15056 248 aaKnown RBP13.22□□□□□ -0.29
SYNE3-201ENST00000334258 RBFAQ8N0V3 343 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 C9orf43Q8TAL5 461 aaPredicted RBP13.22□□□□□ -0.29
SYNE3-201ENST00000334258 SH3KBP1Q96B97 665 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 FRMD6Q96NE9 622 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 RAD9AQ99638 391 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 SLC29A3Q9BZD2 475 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 CLN6Q9NWW5 311 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 POFUT2Q9Y2G5 429 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 A0A1W2PQ72 361 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 SMIM30A4D0T7 59 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 C12orf71A8MTZ7 269 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 PRPS1L1P21108 318 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 PSMA1P25786 263 aaKnown RBP13.22□□□□□ -0.29
SYNE3-201ENST00000334258 CRATP43155 626 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 KCNJ10P78508 379 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 SF1Q15637 639 aaKnown RBP13.22□□□□□ -0.29
SYNE3-201ENST00000334258 EXOC3L2Q2M3D2 409 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 LRRC66Q68CR7 880 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 PAMR1Q6UXH9 720 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 CERS6Q6ZMG9 384 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 DIRAS2Q96HU8 199 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 SEPT5Q99719 369 aaPredicted RBP13.22□□□□□ -0.29
SYNE3-201ENST00000334258 DOHHQ9BU89 302 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 C3orf14Q9HBI5 128 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 RWDD3Q9Y3V2 267 aa13.22□□□□□ -0.29
SYNE3-201ENST00000334258 A0A075B6Q4 140 aa13.21□□□□□ -0.29
SYNE3-201ENST00000334258 TSPAN19P0C672 248 aa13.21□□□□□ -0.29
SYNE3-201ENST00000334258 QPRTQ15274 297 aa13.21□□□□□ -0.29
SYNE3-201ENST00000334258 PYDC2Q56P42 97 aa13.21□□□□□ -0.29
SYNE3-201ENST00000334258 YIF1BQ5BJH7 314 aa13.21□□□□□ -0.29
SYNE3-201ENST00000334258 C16orf59Q7L2K0 433 aa13.21□□□□□ -0.29
SYNE3-201ENST00000334258 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
SYNE3-201ENST00000334258 SLC44A2Q8IWA5 706 aaPredicted RBP13.21□□□□□ -0.29
SYNE3-201ENST00000334258 DBF4BQ8NFT6 615 aa13.21□□□□□ -0.29
SYNE3-201ENST00000334258 OR5H6Q8NGV6 325 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms