RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 ZNF385BQ569K4 471 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 PTOV1Q86YD1 416 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 CCDC71Q8IV32 467 aaPredicted RBP18.32■□□□□ 0.52
LAMP1-201ENST00000332556 CLIP4Q8N3C7 705 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 TTC29Q8NA56 475 aaPredicted RBP18.32■□□□□ 0.52
LAMP1-201ENST00000332556 MINDY2Q8NBR6 621 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 RHOXF1Q8NHV9 184 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 PHF10Q8WUB8 498 aaKnown RBP18.32■□□□□ 0.52
LAMP1-201ENST00000332556 BTN2A2Q8WVV5 523 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 SH3GL1Q99961 368 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 TMEM45AQ9NWC5 275 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 SIRT5Q9NXA8 310 aa18.32■□□□□ 0.52
LAMP1-201ENST00000332556 PDP1Q9P0J1 537 aaPredicted RBP18.32■□□□□ 0.52
LAMP1-201ENST00000332556 PRRT4C9JH25 899 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 MMP20O60882 483 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 ITGAMP11215 1152 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 GTF2E2P29084 291 aaKnown RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 EIF2DP41214 584 aaKnown RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 HNMTP50135 292 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 PRSS36Q5K4E3 855 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 ATAD3BQ5T9A4 648 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 SHQ1Q6PI26 577 aaKnown RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 POC5Q8NA72 575 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 GLYATL1Q969I3 302 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 CIDECQ96AQ7 238 aaPredicted RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 HSH2DQ96JZ2 352 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 EHD1Q9H4M9 534 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 TMEM98Q9Y2Y6 226 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 CAB39Q9Y376 341 aaPredicted RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 EVPLLA8MZ36 301 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 TCEA1P23193 301 aaKnown RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 OR1E2P47887 323 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 CLK1P49759 484 aaKnown RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 DUOXA1Q1HG43 343 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 SOWAHCQ53LP3 525 aaPredicted RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 COX20Q5RI15 118 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 DEPDC1Q5TB30 811 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 BRAT1Q6PJG6 821 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 LYSMD2Q8IV50 215 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 ZZZ3Q8IYH5 903 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 SETD9Q8NE22 299 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 OR7G3Q8NG95 312 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 DCSTAMPQ9H295 470 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 RNF167Q9H6Y7 350 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 TRIOO75962 3097 aa18.31■□□□□ 0.52
LAMP1-201ENST00000332556 TCF20Q9UGU0 1960 aaKnown RBP18.31■□□□□ 0.52
LAMP1-201ENST00000332556 A6NL46 340 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 MPC1LP0DKB6 136 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 DBTP11182 482 aaKnown RBP18.3■□□□□ 0.52
LAMP1-201ENST00000332556 CYP2A6P11509 494 aaPredicted RBP18.3■□□□□ 0.52
LAMP1-201ENST00000332556 PTPN2P17706 415 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 HOXA9P31269 272 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 TGFBR2P37173 567 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 LIPAP38571 399 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 PPP5CP53041 499 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 ZNF77Q15935 545 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 RFX4Q33E94 735 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 TRMT11Q7Z4G4 463 aaKnown RBP18.3■□□□□ 0.52
LAMP1-201ENST00000332556 METTL3Q86U44 580 aaKnown RBP18.3■□□□□ 0.52
LAMP1-201ENST00000332556 OR52J3Q8NH60 311 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 CERS4Q9HA82 394 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 ASIC5Q9NY37 505 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 MAN2B2Q9Y2E5 1009 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 CCDC88CQ9P219 2028 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 NPC1O15118 1278 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 SCAMP1O15126 338 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 RECQL5O94762 991 aaPredicted RBP18.3■□□□□ 0.52
LAMP1-201ENST00000332556 SLCO2B1O94956 709 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 KCNK2O95069 426 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 EPN2O95208 641 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 GSTM1P09488 218 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 JUNDP17535 347 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 NNMTP40261 264 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 CRYBA2P53672 197 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 CREMQ03060 361 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 MVKQ03426 396 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 ABHD18Q0P651 414 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 IL18R1Q13478 541 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 DHCR24Q15392 516 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 STEAP3Q658P3 488 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 CAPN13Q6MZZ7 669 aaPredicted RBP18.3■□□□□ 0.52
LAMP1-201ENST00000332556 MRPL43Q8N983 215 aaKnown RBP18.3■□□□□ 0.52
LAMP1-201ENST00000332556 ATG16L2Q8NAA4 619 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 WDR48Q8TAF3 677 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 ZNF480Q8WV37 535 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 DUSP26Q9BV47 211 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 TPT1P8Q9HAU6 139 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 TRIM39Q9HCM9 518 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 FZD4Q9ULV1 537 aa18.3■□□□□ 0.52
LAMP1-201ENST00000332556 C21orf33P30042 268 aaPredicted RBP18.29■□□□□ 0.52
LAMP1-201ENST00000332556 TBPL1P62380 186 aa18.29■□□□□ 0.52
LAMP1-201ENST00000332556 NFE2L1Q14494 772 aa18.29■□□□□ 0.52
LAMP1-201ENST00000332556 MAD2L1BPQ15013 274 aaPredicted RBP18.29■□□□□ 0.52
LAMP1-201ENST00000332556 ZC3H12BQ5HYM0 836 aaKnown RBP18.29■□□□□ 0.52
LAMP1-201ENST00000332556 OR2T5Q6IEZ7 315 aa18.29■□□□□ 0.52
LAMP1-201ENST00000332556 NAGSQ8N159 534 aa18.29■□□□□ 0.52
LAMP1-201ENST00000332556 OR2T29Q8NH02 315 aa18.29■□□□□ 0.52
LAMP1-201ENST00000332556 CAPSLQ8WWF8 208 aa18.29■□□□□ 0.52
LAMP1-201ENST00000332556 TESCQ96BS2 214 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms