RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 R3HCC1LQ7Z5L2 792 aaKnown RBP16.69■□□□□ 0.26
DDX28-201ENST00000332395 YAF2Q8IY57 180 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 PLGRKTQ9HBL7 147 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 MYNNQ9NPC7 610 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 DZANK1Q9NVP4 752 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 CDH7Q9ULB5 785 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 TSC22D4Q9Y3Q8 395 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 ORC6Q9Y5N6 252 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 LOC100130705A0A1B0GUX0 176 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 KLHL18O94889 574 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 FKBP9O95302 570 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 KLK1P06870 262 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 IL7RP16871 459 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 EEF1B2P24534 225 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 PBX2P40425 430 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 EIF2DP41214 584 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 C2orf80Q0P641 193 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 CST6Q15828 149 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 RBM48Q5RL73 367 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 ZNF773Q6PK81 442 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 Q6ZNX1 250 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 CEP68Q76N32 757 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 VN1R5Q7Z5H4 357 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 FAM129CQ86XR2 697 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 NAGSQ8N159 534 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 OXR1Q8N573 874 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 OR5K2Q8NHB8 316 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 GOT1L1Q8NHS2 421 aaPredicted RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 MAL2Q969L2 176 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 PPCDCQ96CD2 204 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 ASPSCR1Q9BZE9 553 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 GABARAPL1Q9H0R8 117 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 ADNPQ9H2P0 1102 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 LIN28AQ9H9Z2 209 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 BAG5Q9UL15 447 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 FAF1Q9UNN5 650 aaPredicted RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 CFAP20Q9Y6A4 193 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 TRPM6Q9BX84 2022 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 MYO1GB0I1T2 1018 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 DIRAS1O95057 198 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 ERGP11308 486 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 RPL3P39023 403 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 TAS2R50P59544 299 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 RAB39AQ14964 217 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 LAPTM4AQ15012 233 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 ZC3H12BQ5HYM0 836 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 METRNLQ641Q3 311 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 FAM71E1Q6IPT2 247 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 ANGPTL8Q6UXH0 198 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 KRT78Q8N1N4 520 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 SMYD1Q8NB12 490 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 HDAC2Q92769 488 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 CIDECQ96AQ7 238 aaPredicted RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 ISOC1Q96CN7 298 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 BARD1Q99728 777 aaKnown RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 NRTNQ99748 197 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 RSPH9Q9H1X1 276 aaPredicted RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 CXorf21Q9HAI6 301 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 TAC3Q9UHF0 121 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 BLOC1S6Q9UL45 172 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 PCDHGA4Q9Y5G9 962 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 HEMK1Q9Y5R4 338 aaPredicted RBP16.68■□□□□ 0.26
DDX28-201ENST00000332395 REV3LO60673 3130 aa16.68■□□□□ 0.26
DDX28-201ENST00000332395 SH3PXD2BA1X283 911 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 C6orf47O95873 294 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 RPN2P04844 631 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 CRHBPP24387 322 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 IGFBP5P24593 272 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 PTX3P26022 381 aaPredicted RBP16.67■□□□□ 0.26
DDX28-201ENST00000332395 TTKP33981 857 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 PCGF2P35227 344 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 ARHGDIAP52565 204 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 CRYBA2P53672 197 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 CYP2A13Q16696 494 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 ZNF852Q6ZMS4 543 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 HORMAD1Q86X24 394 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 CHDHQ8NE62 594 aaPredicted RBP16.67■□□□□ 0.26
DDX28-201ENST00000332395 TPD52L3Q96J77 140 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 KXD1Q9BQD3 176 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 MBNL1Q9NR56 388 aaKnown RBP16.67■□□□□ 0.26
DDX28-201ENST00000332395 GPATCH2Q9NW75 528 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 SPASTQ9UBP0 616 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 SERGEFQ9UGK8 458 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 RAPGEFL1Q9UHV5 662 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 SH3GLB1Q9Y371 365 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 ZNF701M0R085 212 aaPredicted RBP16.67■□□□□ 0.26
DDX28-201ENST00000332395 SLC16A6O15403 523 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 APODP05090 189 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 AQP1P29972 269 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 DNAJA1P31689 397 aaKnown RBP16.67■□□□□ 0.26
DDX28-201ENST00000332395 POLR2IP36954 125 aaKnown RBP16.67■□□□□ 0.26
DDX28-201ENST00000332395 MVDP53602 400 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 NUP107P57740 925 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 CTBSQ01459 385 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 ARHGAP19Q14CB8 494 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 NEDD8Q15843 81 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 MEP1AQ16819 746 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 MPEG1Q2M385 716 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 ZNF691Q5VV52 312 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 CYP4Z1Q86W10 505 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms