RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ADRA2AP08913 450 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 DDCP20711 480 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 PTX3P26022 381 aaPredicted RBP23.44■■□□□ 1.34
SOX1-201ENST00000330949 HKDC1Q2TB90 917 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 SLC44A2Q8IWA5 706 aaPredicted RBP23.44■■□□□ 1.34
SOX1-201ENST00000330949 SEMA3CQ99985 751 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 PPA2Q9H2U2 334 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 SH3BP4Q9P0V3 963 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 NDRG2Q9UN36 371 aaKnown RBP23.44■■□□□ 1.34
SOX1-201ENST00000330949 COL4A4P53420 1690 aaPredicted RBP23.44■■□□□ 1.34
SOX1-201ENST00000330949 CCNB2O95067 398 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 HAPLN1P10915 354 aaPredicted RBP23.44■■□□□ 1.34
SOX1-201ENST00000330949 SLC2A2P11168 524 aaPredicted RBP23.44■■□□□ 1.34
SOX1-201ENST00000330949 EVI2BP34910 448 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 MXD1Q05195 221 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 BAMBIQ13145 260 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 SGO1Q5FBB7 561 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 BRAT1Q6PJG6 821 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 PRSS42Q7Z5A4 293 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 OR9Q1Q8NGQ5 310 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 CLN6Q9NWW5 311 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 NLKQ9UBE8 527 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 ING4Q9UNL4 249 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 TRAV19A0A0A6YYK7 116 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 SCAMP3O14828 347 aaKnown RBP23.43■■□□□ 1.34
SOX1-201ENST00000330949 CDRT1O95170 752 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 PIPP12273 146 aaPredicted RBP23.43■■□□□ 1.34
SOX1-201ENST00000330949 ABRQ12979 859 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 DOC2BQ14184 412 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 COMMD7Q86VX2 200 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 FAM217AQ8IXS0 508 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 C3orf58Q8NDZ4 430 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 KCNJ9Q92806 393 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 PSMG2Q969U7 264 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 UPRTQ96BW1 309 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 OGDHLQ9ULD0 1010 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 HS3ST4Q9Y661 456 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 OR1I1O60431 355 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 LHX1P48742 406 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 KCNJ10P78508 379 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 HNRNPA0Q13151 305 aaKnown RBP23.43■■□□□ 1.34
SOX1-201ENST00000330949 VEZF1Q14119 521 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 KLHL12Q53G59 568 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 TYW3Q6IPR3 259 aaKnown RBP23.43■■□□□ 1.34
SOX1-201ENST00000330949 GPALPP1Q8IXQ4 340 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 ATP6V1C2Q8NEY4 427 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 EMID1Q96A84 441 aaPredicted RBP23.43■■□□□ 1.34
SOX1-201ENST00000330949 TESCQ96BS2 214 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 NDUFB11Q9NX14 153 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 GPRC5BQ9NZH0 403 aa23.43■■□□□ 1.34
SOX1-201ENST00000330949 M0R129 80 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 SUV39H1O43463 412 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 ICAM2P13598 275 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 ENGP17813 658 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 GPX2P18283 190 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 SSTR4P31391 388 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 MSANTD1Q6ZTZ1 278 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 GLCCI1Q86VQ1 547 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 PTOV1Q86YD1 416 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 CPA6Q8N4T0 437 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 SLC37A3Q8NCC5 494 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 NELL1Q92832 810 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 EXOC2Q96KP1 924 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 PSKH2Q96QS6 385 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 EVA1BQ9NVM1 165 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 NUP214P35658 2090 aaPredicted RBP23.42■■□□□ 1.34
SOX1-201ENST00000330949 CIB4A0PJX0 185 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 LYRM1O43325 122 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 B3GALT4O96024 378 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 CFL1P23528 166 aaKnown RBP23.42■■□□□ 1.34
SOX1-201ENST00000330949 HSPA7P48741 367 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 ZNF140P52738 457 aaPredicted RBP23.42■■□□□ 1.34
SOX1-201ENST00000330949 SPHARQ15513 63 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 AANATQ16613 207 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 XKR4Q5GH76 650 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 GARNL3Q5VVW2 1013 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 C16orf62Q7Z3J2 963 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 SCAMP5Q8TAC9 235 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 ZNF578Q96N58 590 aaPredicted RBP23.42■■□□□ 1.34
SOX1-201ENST00000330949 GFM1Q96RP9 751 aaKnown RBP23.42■■□□□ 1.34
SOX1-201ENST00000330949 POLR1EQ9GZS1 481 aaKnown RBP23.42■■□□□ 1.34
SOX1-201ENST00000330949 ANKRA2Q9H9E1 313 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 CSNK1G1Q9HCP0 422 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 SARS2Q9NP81 518 aaKnown RBP23.42■■□□□ 1.34
SOX1-201ENST00000330949 TMEM184CQ9NVA4 438 aa23.42■■□□□ 1.34
SOX1-201ENST00000330949 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 FFAR2O15552 330 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 MAN2A2P49641 1150 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 CCL15Q16663 113 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 ARSKQ6UWY0 536 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 C1orf52Q8N6N3 182 aaKnown RBP23.41■■□□□ 1.34
SOX1-201ENST00000330949 ZNF431Q8TF32 576 aaPredicted RBP23.41■■□□□ 1.34
SOX1-201ENST00000330949 ZBED6CLQ96FA7 236 aaPredicted RBP23.41■■□□□ 1.34
SOX1-201ENST00000330949 SAMD11Q96NU1 681 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 PIGUQ9H490 435 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 LSM2Q9Y333 95 aaKnown RBP23.41■■□□□ 1.34
SOX1-201ENST00000330949 PCDHGB7Q9Y5F8 929 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 FAM157BP0CG42 384 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 PRPS2P11908 318 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 TTPAP49638 278 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms