RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 KIR3DL1P43629 444 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 C21orf58P58505 322 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 TUBA4AP68366 448 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 CSNK1G2P78368 415 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 PHEXP78562 749 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 REEP5Q00765 189 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 EPHX4Q8IUS5 362 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 ADGRG5Q8IZF4 528 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 SIX5Q8N196 739 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 METTL4Q8N3J2 472 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 RMND5BQ96G75 393 aaPredicted RBP19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 ORAI3Q9BRQ5 295 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 REXO4Q9GZR2 422 aaKnown RBP19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 RMND5AQ9H871 391 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 AURKCQ9UQB9 309 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 PCDHB14Q9Y5E9 798 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 DGKBQ9Y6T7 804 aa19.42■□□□□ 0.7
RIPPLY3-201ENST00000329553 TRBV5-3A0A0A0MS03 114 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 A0A1W2PPC4 97 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 A6NCN8 305 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ANKDD1BA6NHY2 528 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 COX7A2P14406 83 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 IL10P22301 178 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 PSMA4P25789 261 aaKnown RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 SLC5A2P31639 672 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 SLC19A1P41440 591 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ASMTP46597 345 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 WNT3P56703 355 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 CYP4F2P78329 520 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 SRSF11Q05519 484 aaKnown RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 RUNDC3AQ59EK9 446 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ANKRD26P1Q6NSI1 321 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 PTRH1Q86Y79 214 aaKnown RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 DEFB123Q8N688 67 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 SHDQ96IW2 340 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ITCHQ96J02 903 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 TCEAL2Q9H3H9 227 aaPredicted RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 MUC13Q9H3R2 512 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 IKZF5Q9H5V7 419 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 SPHK1Q9NYA1 384 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 LRP4O75096 1905 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 GABRR3A8MPY1 467 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ARPC2O15144 300 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 LCMT2O60294 686 aaKnown RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 SCN2BO60939 215 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ERN1O75460 977 aaKnown RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 KLHL18O94889 574 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 TNFP01375 233 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 PEBP1P30086 187 aaKnown RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 RPS6KA3P51812 740 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 DPY19L1Q2PZI1 675 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ZNF542PQ5EBM4 170 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 LRIF1Q5T3J3 769 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 CBR4Q8N4T8 237 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 TRIML2Q8N7C3 387 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 SNX19Q92543 992 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 OCEL1Q9H607 264 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 KLF15Q9UIH9 416 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 ARHGEF17Q96PE2 2063 aaPredicted RBP19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 FANCMQ8IYD8 2048 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 DNAH14Q0VDD8 3507 aa19.41■□□□□ 0.7
RIPPLY3-201ENST00000329553 A0A096LPI6 279 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 SAC3D1A6NKF1 404 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 GSNP06396 782 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 THEGLP0DJG4 465 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 LAMP1P11279 417 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 F3P13726 295 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 NELFEP18615 380 aaKnown RBP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 FASP25445 335 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 HTR1EP28566 365 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 PTPN6P29350 595 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 CDKN2CP42773 168 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 OR4D2P58180 307 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 EIF2B5Q13144 721 aaKnown RBP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 PLD3Q8IV08 490 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 ADHFE1Q8IWW8 467 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 OR4E2Q8NGC2 313 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 OR8J2Q8NGG1 315 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 DNAJB8Q8NHS0 232 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 ZNF583Q96ND8 569 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 THUMPD3Q9BV44 507 aaKnown RBP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 NT5DC2Q9H857 520 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 CLK4Q9HAZ1 481 aaKnown RBP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 ADGRE2Q9UHX3 823 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 EXO1Q9UQ84 846 aaKnown RBP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 GON4LQ3T8J9 2241 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 NUP214P35658 2090 aaPredicted RBP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 PDLIM1O00151 329 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 SCAMP2O15127 329 aaKnown RBP19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 YY2O15391 372 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 OR1F1O43749 312 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 GPIP06744 558 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 KLK1P06870 262 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 NCK1P16333 377 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 NDUFS1P28331 727 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 PCSK6P29122 969 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 CCT8P50990 548 aa19.4■□□□□ 0.7
RIPPLY3-201ENST00000329553 ZP2Q05996 745 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms