RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 C1GALT1C1Q96EU7 318 aa11.4□□□□□ -0.58
DDR1-223ENST00000324771 RBM18Q96H35 190 aaKnown RBP11.4□□□□□ -0.58
DDR1-223ENST00000324771 SLC38A3Q99624 504 aa11.4□□□□□ -0.58
DDR1-223ENST00000324771 THUMPD1Q9NXG2 353 aaKnown RBP11.4□□□□□ -0.58
DDR1-223ENST00000324771 LOXHD1Q8IVV2 1947 aa11.4□□□□□ -0.58
DDR1-223ENST00000324771 FADS2P1A8MWK0 482 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 B4GALT2O60909 372 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 SCN2BO60939 215 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 LATS1O95835 1130 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 SPTBP11277 2137 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 AK4P27144 223 aaPredicted RBP11.4□□□□□ -0.59
DDR1-223ENST00000324771 KDELR2P33947 212 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 DPP6P42658 865 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 CCT3P49368 545 aaKnown RBP11.4□□□□□ -0.59
DDR1-223ENST00000324771 CLCN7P51798 805 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 MLLT1Q03111 559 aaPredicted RBP11.4□□□□□ -0.59
DDR1-223ENST00000324771 CYBRD1Q53TN4 286 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 SPIN4Q56A73 249 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 MACC1Q6ZN28 852 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 LILRA2Q8N149 483 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 OR8K5Q8NH50 307 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 FRS2Q8WU20 508 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 HHIPL1Q96JK4 782 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 ZBP1Q9H171 429 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 KCNK12Q9HB15 430 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 TBX21Q9UL17 535 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 CLEC4AQ9UMR7 237 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 RBMX2Q9Y388 322 aaKnown RBP11.4□□□□□ -0.59
DDR1-223ENST00000324771 IRAK3Q9Y616 596 aa11.4□□□□□ -0.59
DDR1-223ENST00000324771 PDE9AO76083 593 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 BMP10O95393 424 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 PEX11BO96011 259 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 SDC1P18827 310 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 AZGP1P25311 298 aaKnown RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 EIF2B2P49770 351 aaKnown RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 OLR1P78380 273 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 TOR1AIP1Q5JTV8 583 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 SBSNQ6UWP8 590 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 COMMD6Q7Z4G1 85 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 SPRED2Q7Z698 418 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 FBXO15Q8NCQ5 510 aaPredicted RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 NETO1Q8TDF5 533 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 TMEM125Q96AQ2 219 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 TMIGD2Q96BF3 282 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 COPS4Q9BT78 406 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 J3QRK9 145 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 ADAMDEC1O15204 470 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 ZNF155Q12901 538 aaPredicted RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 HNRNPA1L2Q32P51 320 aaKnown RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 SPANXN2Q5MJ10 180 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 DEPDC4Q8N2C3 294 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 ATP6V1C2Q8NEY4 427 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 FBXL8Q96CD0 374 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 CHFRQ96EP1 664 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 RNFT2Q96EX2 444 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 SPATA5L1Q9BVQ7 753 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 POLR2J3Q9H1A7 115 aaKnown RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 EHD3Q9NZN3 535 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 ARID1AO14497 2285 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 LINC01553A4QN01 128 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 EEDO75530 441 aaKnown RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 CCNDBP1O95273 360 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 CCR3P51677 355 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 DEFA1P59665 94 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 DEFA3P59666 94 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 PCDH1Q08174 1060 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 TUBB3Q13509 450 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 NPTX1Q15818 432 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 PRRT3Q5FWE3 981 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 ARMC4Q5T2S8 1044 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 LIMS2Q7Z4I7 341 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 SRFBP1Q8NEF9 429 aaKnown RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 TEX47Q8TBZ9 253 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 TMEM203Q969S6 136 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 CIDECQ96AQ7 238 aaPredicted RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 SFXN1Q9H9B4 322 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 IL21RQ9HBE5 538 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 TM7SF3Q9NS93 570 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 RIF1Q5UIP0 2472 aaKnown RBP11.39□□□□□ -0.59
DDR1-223ENST00000324771 APC2O95996 2303 aa11.39□□□□□ -0.59
DDR1-223ENST00000324771 K7ESM1 405 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 RNGTTO60942 597 aaKnown RBP11.38□□□□□ -0.59
DDR1-223ENST00000324771 UGT2B11O75310 529 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 CCNB2O95067 398 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 ZDHHC11BP0C7U3 371 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 CSNK2A2P19784 350 aaPredicted RBP11.38□□□□□ -0.59
DDR1-223ENST00000324771 CD9P21926 228 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 TIA1P31483 386 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDR1-223ENST00000324771 TTKP33981 857 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 IL12RB1P42701 662 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 TEAD4Q15561 434 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 VMACQ2NL98 169 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 DPP10Q8N608 796 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 MYDGFQ969H8 173 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 TBX5Q99593 518 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 OR51V1Q9H2C8 321 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 PRDM8Q9NQV8 689 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 LOC100130705A0A1B0GUX0 176 aa11.38□□□□□ -0.59
DDR1-223ENST00000324771 GTPBP1O00178 669 aaKnown RBP11.38□□□□□ -0.59
DDR1-223ENST00000324771 AP2A2O94973 939 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms