RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 BBS2Q9BXC9 721 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 TP63Q9H3D4 680 aaPredicted RBP18.37■□□□□ 0.53
RTN4-201ENST00000317610 GPATCH2Q9NW75 528 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 CNOT2Q9NZN8 540 aaKnown RBP18.37■□□□□ 0.53
RTN4-201ENST00000317610 BACE2Q9Y5Z0 518 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 KIAA1671Q9BY89 1806 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 EFCAB10A6NFE3 127 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 PRAMEF25A6NGN4 478 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 RNASET2O00584 256 aaKnown RBP18.37■□□□□ 0.53
RTN4-201ENST00000317610 KIAA0513O60268 411 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 TNFRSF21O75509 655 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 DNTTP04053 509 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 LHCGRP22888 699 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 TCEA1P23193 301 aaKnown RBP18.37■□□□□ 0.53
RTN4-201ENST00000317610 LIMS1P48059 325 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 CDH12P55289 794 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 PCDH1Q08174 1060 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 Q8N9G6 341 aaPredicted RBP18.37■□□□□ 0.53
RTN4-201ENST00000317610 CAPSLQ8WWF8 208 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 ECHDC3Q96DC8 303 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 EMILIN2Q9BXX0 1053 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 MS4A12Q9NXJ0 267 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 DUSP12Q9UNI6 340 aa18.37■□□□□ 0.53
RTN4-201ENST00000317610 SH3D21A4FU49 640 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 ZW10O43264 779 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 TNFRSF1BP20333 461 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 DOC2AQ14183 400 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 DGKKQ5KSL6 1271 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 METTL3Q86U44 580 aaKnown RBP18.36■□□□□ 0.53
RTN4-201ENST00000317610 THOC6Q86W42 341 aaKnown RBP18.36■□□□□ 0.53
RTN4-201ENST00000317610 OR2AP1Q8NGE2 309 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 GOT1L1Q8NHS2 421 aaPredicted RBP18.36■□□□□ 0.53
RTN4-201ENST00000317610 UTP15Q8TED0 518 aaKnown RBP18.36■□□□□ 0.53
RTN4-201ENST00000317610 TP53INP1Q96A56 240 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 ASIC4Q96FT7 647 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 MCCC1Q96RQ3 725 aaPredicted RBP18.36■□□□□ 0.53
RTN4-201ENST00000317610 IMPAD1Q9NX62 359 aa18.36■□□□□ 0.53
RTN4-201ENST00000317610 E7EQ34 232 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 CCNKO75909 580 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ETHE1O95571 254 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 EFEMP2O95967 443 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 HNF4AP41235 474 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 FLT3LGP49771 235 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ACLYP53396 1101 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 CST9Q5W186 159 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 USP45Q70EL2 814 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 KLHDC8AQ8IYD2 350 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 C1orf52Q8N6N3 182 aaKnown RBP18.35■□□□□ 0.53
RTN4-201ENST00000317610 OR4A15Q8NGL6 344 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 OR52J3Q8NH60 311 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 TAPBPLQ9BX59 468 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ARHGAP39Q9C0H5 1083 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 THSD7BQ9C0I4 1608 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 KPNA5O15131 536 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 OPN1SWP03999 348 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ADRA2AP08913 450 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ANXA4P09525 319 aaPredicted RBP18.35■□□□□ 0.53
RTN4-201ENST00000317610 ATP1B2P14415 290 aaPredicted RBP18.35■□□□□ 0.53
RTN4-201ENST00000317610 ITGA2P17301 1181 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 HMGA2P52926 109 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 RBBP4Q09028 425 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 CRHR2Q13324 411 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ZDHHC20Q5W0Z9 365 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 SPATC1Q76KD6 591 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 FLCNQ8NFG4 579 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 CXorf40BQ96DE9 158 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 OR5M11Q96RB7 305 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 MGLLQ99685 303 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 C3orf14Q9HBI5 128 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ITM2CQ9NQX7 267 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 ABCB8Q9NUT2 735 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 SPATA7Q9P0W8 599 aa18.35■□□□□ 0.53
RTN4-201ENST00000317610 CCRL2O00421 344 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 C1SP09871 688 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 HSMCR30P0CW71 290 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 POLR2EP19388 210 aaKnown RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 CYP4F2P78329 520 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 DDX39BQ13838 428 aaKnown RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 COX20Q5RI15 118 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 RSBN1Q5VWQ0 802 aaPredicted RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 ZNF544Q6NX49 715 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 SERPINA13PQ6UXR4 307 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 TMEM150AQ86TG1 271 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 UBQLNLQ8IYU4 475 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 OR9Q2Q8NGE9 314 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 OR6F1Q8NGZ6 308 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 SETD6Q8TBK2 473 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 BHMTQ93088 406 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 TRNT1Q96Q11 434 aaKnown RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 SLC22A12Q96S37 553 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 MAPKAP1Q9BPZ7 522 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 SLC30A2Q9BRI3 323 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 BHLHE41Q9C0J9 482 aaPredicted RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 OR2B2Q9GZK3 357 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 TAS2R16Q9NYV7 291 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 CRNNQ9UBG3 495 aaPredicted RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 ATP6V1HQ9UI12 483 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 EXO1Q9UQ84 846 aaKnown RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 H3BQ06 376 aaPredicted RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 SSX4O60224 188 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms