RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 CLCN4P51793 760 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 GPX6P59796 221 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CD83Q01151 205 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ALDH6A1Q02252 535 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 RPA4Q13156 261 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 COL19A1Q14993 1142 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 UBAP2Q5T6F2 1119 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF227Q86WZ6 799 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 MIB1Q86YT6 1006 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 FUNDC1Q8IVP5 155 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 HS3ST5Q8IZT8 346 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 KIAA1958Q8N8K9 716 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 C2CD4AQ8NCU7 369 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LFNGQ8NES3 379 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 TBC1D20Q96BZ9 403 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CDKN2AIPNLQ96HQ2 116 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 FCRL1Q96LA6 429 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 SIGLEC10Q96LC7 697 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 PPP1R16BQ96T49 567 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LHPPQ9H008 270 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CST11Q9H112 138 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 PAPPAQ13219 1627 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 SLC22A5O76082 557 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 HOXB1P14653 301 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 HNRNPLP14866 589 aaKnown RBP eCLIP4.37□□□□□ -1.719e-8■□□□□ 9.2
CNOT1-201ENST00000317147 ZNF26P17031 533 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZP3P21754 424 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CRATP43155 626 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 STT3AP46977 705 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 NUMBP49757 651 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CRYZQ08257 329 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ST3GAL4Q11206 333 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 HNF4GQ14541 408 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LARS2Q15031 903 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 PAFAH1B3Q15102 231 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 SIX1Q15475 284 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ALG11Q2TAA5 492 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 TMEM214Q6NUQ4 689 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 INTS5Q6P9B9 1019 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CES3Q6UWW8 571 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 KIAA1324Q6UXG2 1013 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ASPGQ86U10 573 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LRRC56Q8IYG6 542 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 PHACTR4Q8IZ21 702 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 KCTD13Q8WZ19 329 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 YIPF2Q9BWQ6 316 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CEP41Q9BYV8 373 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 OSBPL2Q9H1P3 480 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 SLC25A32Q9H2D1 315 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF214Q9UL59 606 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 FAM50BQ9Y247 325 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LRRC72A6NJI9 287 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 DCLK1O15075 740 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CREG1O75629 220 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ERCC1P07992 297 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 HOXA10P31260 410 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 FEN1P39748 380 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 GUCA1AP43080 201 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 OGDHQ02218 1023 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 TAF1AQ15573 450 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF691Q5VV52 312 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF574Q6ZN55 896 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 OR52K2Q8NGK3 314 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 IL31RAQ8NI17 732 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF384Q8TF68 577 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LRFN5Q96NI6 719 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 DOHHQ9BU89 302 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LGR4Q9BXB1 951 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 GSX2Q9BZM3 304 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 TDRD3Q9H7E2 651 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 C8orf33Q9H7E9 229 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF395Q9H8N7 513 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ACSS2Q9NR19 701 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 EGFL7Q9UHF1 273 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ZMYM5Q9UJ78 669 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 TLR4O00206 839 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 PHYHO14832 338 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 MID1O15344 667 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 ALPLP05186 524 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 NAT1P18440 290 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CD9P21926 228 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 TLX1P31314 330 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 RGS6P49758 472 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 XKP51811 444 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 NR0B1P51843 470 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 SOX10P56693 466 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LSM3P62310 102 aaKnown RBP4.37□□□□□ -1.71
CNOT1-201ENST00000317147 DEFA5Q01523 94 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 MBTD1Q05BQ5 628 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 GPR19Q15760 415 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 TAZQ16635 292 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 DUOXA1Q1HG43 343 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 FAM182AQ5T1J6 154 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 CATSPERGQ6ZRH7 1159 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 FAM183BPQ6ZVS7 135 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 LIX1LQ8IVB5 337 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 PHTF2Q8N3S3 785 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 IL17RCQ8NAC3 791 aa4.37□□□□□ -1.71
CNOT1-201ENST00000317147 BPIFB1Q8TDL5 484 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms