RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DNAJA1P31689 397 aaKnown RBP12.22□□□□□ -0.45
RETREG3-201ENST00000309428 CDKN2CP42773 168 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 METAP1P53582 386 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 RAET1GQ6H3X3 334 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 VASH1Q7L8A9 365 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-201ENST00000309428 KCNJ9Q92806 393 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 FEVQ99581 238 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 OSBPL10Q9BXB5 764 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 TVP23BQ9NYZ1 205 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 LHX3Q9UBR4 397 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 DHRS7Q9Y394 339 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 PCDHGB6Q9Y5F9 930 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 CKAP5Q14008 2032 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 TRAV19A0A0A6YYK7 116 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 ASPDHA6ND91 283 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 C12orf71A8MTZ7 269 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 HOXC8P31273 242 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 CCR7P32248 378 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 ATP4BP51164 291 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 ADARB1P78563 741 aaKnown RBP12.22□□□□□ -0.45
RETREG3-201ENST00000309428 SNAPC1Q16533 368 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 CRTC1Q6UUV9 634 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 CEP68Q76N32 757 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 TEX26Q8N6G2 289 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 ZFP41Q8N8Y5 198 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 KREMEN2Q8NCW0 462 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 RHOXF1Q8NHV9 184 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 TANKQ92844 425 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 OR51B5Q9H339 312 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 SUV39H2Q9H5I1 410 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 GPN2Q9H9Y4 310 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-201ENST00000309428 IL1RAPQ9NPH3 570 aa12.22□□□□□ -0.45
RETREG3-201ENST00000309428 H2AFY2Q9P0M6 372 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-201ENST00000309428 M0QX08 132 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 NUAK1O60285 661 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 NOS1APO75052 506 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 NUDT7P0C024 238 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 HTR7P34969 479 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 HMGCLP35914 325 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 VIPR2P41587 438 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 RPS26P62854 115 aaKnown RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 RING1Q06587 406 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 KRT33BQ14525 404 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 USP30Q70CQ3 517 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 CHST9Q7L1S5 443 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 SNX20Q7Z614 316 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 GRASPQ7Z6J2 395 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 ZZZ3Q8IYH5 903 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 OR4A15Q8NGL6 344 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 JPH3Q8WXH2 748 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 MCMBPQ9BTE3 642 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 SORBS1Q9BX66 1292 aaKnown RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 ASPNQ9BXN1 380 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 MMP27Q9H306 513 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 PDFQ9HBH1 243 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 TMEM98Q9Y2Y6 226 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 IGLV3-10A0A075B6K4 115 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 ANKRD34BA5PLL1 514 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 LEFTY2O00292 366 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 RTCAO00442 366 aaKnown RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 HAT1O14929 419 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 TSPAN6O43657 245 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 LEFTY1O75610 366 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 PCDH8O95206 1070 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 EPOP01588 193 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 RPS17P08708 135 aaKnown RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 CTNNB1P35222 781 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 NPRL3Q12980 569 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 GRIN2CQ14957 1233 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 CRTC2Q53ET0 693 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 LHX8Q68G74 356 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 SBSNQ6UWP8 590 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 AMIGO1Q86WK6 493 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 ASZ1Q8WWH4 475 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 ZNF583Q96ND8 569 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 TRIB3Q96RU7 358 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 MACROD1Q9BQ69 325 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 OR2AG1Q9H205 316 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 ZNF385DQ9H6B1 395 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 CACYBPQ9HB71 228 aaKnown RBP12.21□□□□□ -0.45
RETREG3-201ENST00000309428 SGK2Q9HBY8 427 aa12.21□□□□□ -0.45
RETREG3-201ENST00000309428 TDRD15B5MCY1 1934 aaKnown RBP12.21□□□□□ -0.46
RETREG3-201ENST00000309428 HIDE1A8MVS5 230 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 TSPAN12O95859 305 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF267Q14586 743 aaPredicted RBP12.21□□□□□ -0.46
RETREG3-201ENST00000309428 CPTPQ5TA50 214 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 LIPKQ5VXJ0 399 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 TMEM220Q6QAJ8 160 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 NXPE1Q8N323 547 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 C10orf111Q8N326 155 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 PARP16Q8N5Y8 322 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 SIPA1Q96FS4 1042 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 SLC46A2Q9BY10 475 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 PLSCR3Q9NRY6 295 aa12.21□□□□□ -0.46
RETREG3-201ENST00000309428 SPIN1Q9Y657 262 aaPredicted RBP12.21□□□□□ -0.46
RETREG3-201ENST00000309428 H0YC42 278 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 TYRP14679 529 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms