RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 ERVK-21P61565 698 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 USP30Q70CQ3 517 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 LIMS2Q7Z4I7 341 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 LAPTM4BQ86VI4 370 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 HDDC3Q8N4P3 179 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 NEK7Q8TDX7 302 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 ADAMTS15Q8TE58 950 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 ZNF296Q8WUU4 475 aaPredicted RBP8.99□□□□□ -0.97
XCR1-201ENST00000309285 TREM1Q9NP99 234 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 ZNF840PA6NDX5 716 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 ANKRD66B4E2M5 251 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 SERPINB7O75635 380 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 CCNDBP1O95273 360 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 EPOP01588 193 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 FUCA1P04066 466 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 OGNP20774 298 aaKnown RBP8.99□□□□□ -0.97
XCR1-201ENST00000309285 PCSK6P29122 969 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 MASP1P48740 699 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 LAPTM5Q13571 262 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 RAPSNQ13702 412 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 TAF1AQ15573 450 aaPredicted RBP8.99□□□□□ -0.97
XCR1-201ENST00000309285 CRTC1Q6UUV9 634 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 SH2D5Q6ZV89 423 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 TAS1R1Q7RTX1 841 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 SNX20Q7Z614 316 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 DCP2Q8IU60 420 aaKnown RBP8.99□□□□□ -0.97
XCR1-201ENST00000309285 HID1Q8IV36 788 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 FAM109AQ8N4B1 249 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 ANKLE1Q8NAG6 615 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 SIDT2Q8NBJ9 832 aaKnown RBP8.99□□□□□ -0.97
XCR1-201ENST00000309285 OR9I1Q8NGQ6 314 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 OR8K3Q8NH51 312 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 LGALS12Q96DT0 336 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 IGSF21Q96ID5 467 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 PSKH2Q96QS6 385 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 TMEM175Q9BSA9 504 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 MRM3Q9HC36 420 aaKnown RBP8.99□□□□□ -0.97
XCR1-201ENST00000309285 DUS2Q9NX74 493 aaKnown RBP8.99□□□□□ -0.97
XCR1-201ENST00000309285 APC2O95996 2303 aa8.99□□□□□ -0.97
XCR1-201ENST00000309285 FXYD6-FXYD2A0A087WZ82 144 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 A0A1W2PQ67 120 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 AKAP8O43823 692 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 SSX4O60224 188 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 IMPDH1P20839 514 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 LEPRP48357 1165 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 CDKL1Q00532 357 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 PCDH1Q08174 1060 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ILF3Q12906 894 aaKnown RBP eCLIP8.98□□□□□ -0.97
XCR1-201ENST00000309285 TRIM40Q6P9F5 258 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 TMCO2Q7Z6W1 182 aaPredicted RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 CPA6Q8N4T0 437 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 KCT2Q8NC54 265 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 OR6C4Q8NGE1 309 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 PXYLP1Q8TE99 480 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 EXOSC8Q96B26 276 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 TUBA1CQ9BQE3 449 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 POLR2J2Q9GZM3 115 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 FXYD6Q9H0Q3 95 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 SLA2Q9H6Q3 261 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 TBC1D17Q9HA65 648 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 SLC39A1Q9NY26 324 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 HCN3Q9P1Z3 774 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 DNAJC13O75165 2243 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 LOC100130705A0A1B0GUX0 176 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 TMEM189-UBE2V1I3L0A0 370 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 PIP5K1BO14986 540 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 RBMXL2O75526 392 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 TRBC1P01850 177 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 GABRB3P28472 473 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 HSPA7P48741 367 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 LCP2Q13094 533 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 FGFBP1Q14512 234 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ARSKQ6UWY0 536 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ZDHHC21Q8IVQ6 265 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 NELL1Q92832 810 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 MED30Q96HR3 178 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 SPATA5L1Q9BVQ7 753 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 CST11Q9H112 138 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ELAC1Q9H777 363 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 SMURF2Q9HAU4 748 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 PLAC1Q9HBJ0 212 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ALG5Q9Y673 324 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 MAU2Q9Y6X3 613 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 INMT-MINDY4F8WBC2 141 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ADAM12O43184 909 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 B4GALT3O60512 393 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 MATN4O95460 622 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 S1PR4O95977 384 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ALPIP09923 528 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 CSKP41240 450 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 STC1P52823 247 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 NCS1P62166 190 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 FOXM1Q08050 763 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 CEACAM7Q14002 265 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 FOXB2Q5VYV0 432 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 KDELC1Q6UW63 502 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 FAM220AQ7Z4H9 259 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 OXR1Q8N573 874 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 KREMEN2Q8NCW0 462 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ZCCHC10Q8TBK6 192 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms