RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PHC2Q8IXK0 858 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 KCT2Q8NC54 265 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 PSD4Q8NDX1 1056 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 OR2M7Q8NG81 312 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 OR5T3Q8NGG3 340 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 TBC1D20Q96BZ9 403 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 PRAP1Q96NZ9 151 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 P2RY12Q9H244 342 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 ALKBH4Q9NXW9 302 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 KCMF1Q9P0J7 381 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 TRPS1Q9UHF7 1281 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 FOXD3Q9UJU5 478 aaPredicted RBP11.01□□□□□ -0.65
SMIM4-201ENST00000307106 ACAD8Q9UKU7 415 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 ERVK-11Q9UQG0 969 aa11.01□□□□□ -0.65
SMIM4-201ENST00000307106 KCNE1BA0A087WTH5 132 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 TRBV11-1A0A0K0K1C0 115 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 A0A1B0GVC2 190 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 ZNF839A8K0R7 811 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 CLCA1A8K7I4 914 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 HSPB2A8KAH6 182 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 AQP7O14520 342 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 DVL2O14641 736 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 BMP5P22003 454 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 JAK1P23458 1154 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 HSD17B2P37059 387 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 TTPAP49638 278 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 RPS15AP62244 130 aaKnown RBP11□□□□□ -0.65
SMIM4-201ENST00000307106 ACVR1Q04771 509 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 HSPB2Q16082 182 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 FBXL19-AS1Q494R0 122 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 THEMIS2Q5TEJ8 643 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 NDUFAF5Q5TEU4 345 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 CAPN12Q6ZSI9 719 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 KIAA0408Q6ZU52 694 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 FAM109AQ8N4B1 249 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 CAMKVQ8NCB2 501 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 NFAM1Q8NET5 270 aaPredicted RBP11□□□□□ -0.65
SMIM4-201ENST00000307106 OR52K1Q8NGK4 314 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 SARAFQ96BY9 339 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 ZNF778Q96MU6 729 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 PTCHD1Q96NR3 888 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 PKP4Q99569 1192 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 CNPPD1Q9BV87 410 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 FAM114A2Q9NRY5 505 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 CATSPERZQ9NTU4 200 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 MARCH4Q9P2E8 410 aaPredicted RBP11□□□□□ -0.65
SMIM4-201ENST00000307106 FBXW2Q9UKT8 454 aa11□□□□□ -0.65
SMIM4-201ENST00000307106 DRG1Q9Y295 367 aaKnown RBP11□□□□□ -0.65
SMIM4-201ENST00000307106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11□□□□□ -0.65
SMIM4-201ENST00000307106 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
SMIM4-201ENST00000307106 RAI1Q7Z5J4 1906 aaPredicted RBP10.99□□□□□ -0.65
SMIM4-201ENST00000307106 A0A0G2JMM0 328 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 A0A1W2PPB8 328 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 A0A1W2PRS3 328 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 A8MUA0 341 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 A8MVJ9 347 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 KIR3DP1A8MWS1 328 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 E7ENX8 843 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 PSMD3O43242 534 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 B4GALT2O60909 372 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 PSIP1O75475 530 aaKnown RBP10.99□□□□□ -0.65
SMIM4-201ENST00000307106 GLSO94925 669 aaPredicted RBP10.99□□□□□ -0.65
SMIM4-201ENST00000307106 GOSR1O95249 250 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 SLC16A8O95907 504 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 GAS8O95995 478 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 GABRA1P14867 456 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 MAGEA5P43359 124 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 MAN2A2P49641 1150 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 SSR4P51571 173 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 CLCN2P51788 898 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 MEF2AQ02078 507 aaPredicted RBP10.99□□□□□ -0.65
SMIM4-201ENST00000307106 TAP2Q03519 686 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 CDH17Q12864 832 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 POU4F3Q15319 338 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 P3H1Q32P28 736 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 LINC00523Q86TU6 105 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 LRRC75A-AS1Q8N1F1 130 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 TMEM251Q8N6I4 163 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 APCDD1LQ8NCL9 501 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 LINC01560Q8TB33 94 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 ZNF480Q8WV37 535 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 ZNF592Q92610 1267 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 KRT35Q92764 455 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 TM4SF19Q96DZ7 209 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 YIPF4Q9BSR8 244 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 LDAHQ9H6V9 325 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 SPTLC3Q9NUV7 552 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 TMEM184CQ9NVA4 438 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 HPF1Q9NWY4 346 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 MTRF1LQ9UGC7 380 aaKnown RBP10.99□□□□□ -0.65
SMIM4-201ENST00000307106 RIMKLBQ9ULI2 386 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 PCDHA3Q9Y5H8 950 aa10.99□□□□□ -0.65
SMIM4-201ENST00000307106 CR1P17927 2039 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 A0A1W2PPR1 153 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 TRIM64A6NGJ6 449 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 TRIM64BA6NI03 449 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 G3V3Y1 287 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 PJA2O43164 708 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 SUSD5O60279 629 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 SMPD2O60906 423 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms