RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CHCHD4Q8N4Q1 142 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 OR10Q1Q8NGQ4 319 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 DENND1AQ8TEH3 1009 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 A0A0X1KG70 313 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 TBX1O43435 398 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 C1GALT1C1LP0DN25 315 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 UQCRC2P22695 453 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 TSPAN5P62079 268 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 MC1RQ01726 317 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 MOGSQ13724 837 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 MAPK14Q16539 360 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 CARTPTQ16568 116 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.4■□□□□ 0.063e-9■■□□□ 11.4
USP42-201ENST00000306177 PSAPL1Q6NUJ1 521 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 TREML1Q86YW5 311 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 HIST1H2AAQ96QV6 131 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 CD180Q99467 661 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 SGIP1Q9BQI5 828 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 MALT1Q9UDY8 824 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 ACSL1P33121 698 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 KIAA1614Q5VZ46 1190 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 TCEAL6Q6IPX3 200 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 KLHDC10Q6PID8 442 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 DNM1P34Q6PK57 102 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 GALNTL5Q7Z4T8 443 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 ZFAND4Q86XD8 727 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 OR4K1Q8NGD4 311 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 KLHDC7BQ96G42 594 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 FAM210AQ96ND0 272 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 PTBP2Q9UKA9 531 aaKnown RBP15.4■□□□□ 0.06
USP42-201ENST00000306177 HCN4Q9Y3Q4 1203 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 GRIP1Q9Y3R0 1128 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 A0A096LPI6 279 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 CHRM1P11229 460 aaPredicted RBP15.39■□□□□ 0.05
USP42-201ENST00000306177 FDXRP22570 491 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 NUDT6P53370 316 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 ADAM8P78325 824 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 ATG9BQ674R7 924 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 MRPL10Q7Z7H8 261 aaKnown RBP15.39■□□□□ 0.05
USP42-201ENST00000306177 OR2M4Q96R27 311 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 SFXN1Q9H9B4 322 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 MARCH4Q9P2E8 410 aaPredicted RBP15.39■□□□□ 0.05
USP42-201ENST00000306177 PDYNP01213 254 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 HSD3B1P14060 373 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 HSD3B2P26439 372 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 CASRP41180 1078 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 MAP3K8P41279 467 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 TMEM164Q5U3C3 297 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 ANO7Q6IWH7 933 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 NPWQ8N729 165 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 COQ8BQ96D53 544 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 GFM1Q96RP9 751 aaKnown RBP15.39■□□□□ 0.05
USP42-201ENST00000306177 HERC2P3Q9BVR0 1158 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 DCSTAMPQ9H295 470 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 WDR45Q9Y484 360 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 VEGFDO43915 354 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 CCDC36Q8IYA8 594 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 KXD1Q9BQD3 176 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 SPATA9Q9BWV2 254 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 CHMP1AQ9HD42 196 aaPredicted RBP15.39■□□□□ 0.05
USP42-201ENST00000306177 KAT6AQ92794 2004 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 PAK4O96013 591 aaPredicted RBP15.39■□□□□ 0.05
USP42-201ENST00000306177 KCNC4Q03721 635 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 NCEH1Q6PIU2 408 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 NKD1Q969G9 470 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 RTP4Q96DX8 246 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 TOR3AQ9H497 397 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 SDHAF3Q9NRP4 125 aa15.39■□□□□ 0.05
USP42-201ENST00000306177 M0QZQ0 153 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 GATBO75879 557 aaKnown RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 DBIP07108 87 aaKnown RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 HRH2P25021 359 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 CDKN2DP55273 166 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 TUBA4AP68366 448 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 HYAL2Q12891 473 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 ELAVL3Q14576 367 aaKnown RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 PTGR1Q14914 329 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 SFT2D3Q587I9 215 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 NIPAL1Q6NVV3 410 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 MARCH9Q86YJ5 346 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 PGAP3Q96FM1 320 aaPredicted RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 TRIM36Q9NQ86 728 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 PRAMEF33A0A0G2JMD5 474 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 TLX2O43763 284 aaPredicted RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 PRAMEF10O60809 474 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 ZNF20P17024 532 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 POLR2CP19387 275 aaPredicted RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 PRKACGP22612 351 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 RAB2AP61019 212 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 CSTF1Q05048 431 aaKnown RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 GRB7Q14451 532 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 EIF4HQ15056 248 aaKnown RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 PHF19Q5T6S3 580 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 GALNT15Q8N3T1 639 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 IL23AQ9NPF7 189 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 MGAT4BQ9UQ53 548 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 TIAM2Q8IVF5 1701 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 KLF8O95600 359 aaPredicted RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 ECHS1P30084 290 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms