RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 EGFL8Q99944 293 aa15.31■□□□□ 0.04
SRGAP2C-201ENST00000304465 TRIM54Q9BYV2 358 aa15.31■□□□□ 0.04
SRGAP2C-201ENST00000304465 TRIM4Q9C037 500 aa15.31■□□□□ 0.04
SRGAP2C-201ENST00000304465 ING2Q9H160 280 aa15.31■□□□□ 0.04
SRGAP2C-201ENST00000304465 SEMA4BQ9NPR2 832 aaPredicted RBP15.31■□□□□ 0.04
SRGAP2C-201ENST00000304465 STOX2Q9P2F5 926 aaPredicted RBP15.31■□□□□ 0.04
SRGAP2C-201ENST00000304465 CFAP46Q8IYW2 2715 aa15.31■□□□□ 0.04
SRGAP2C-201ENST00000304465 H3BMH7 237 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 OR7A17O14581 309 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 PRICKLE3O43900 615 aaPredicted RBP15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 JUNP05412 331 aaKnown RBP15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 CAPN1P07384 714 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 FGF4P08620 206 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 HIST1H2AGP0C0S8 130 aaPredicted RBP15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 HIST1H2ADP20671 130 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 IMPA1P29218 277 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 FOLR3P41439 243 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 HNMTP50135 292 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 CCL11P51671 97 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 RRADP55042 308 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 AQP5P55064 265 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 NKAIN1Q4KMZ8 207 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 SH2D4BQ5SQS7 431 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 FCRL6Q6DN72 434 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 TTLL10Q6ZVT0 673 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 ASB18Q6ZVZ8 466 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 TCAIMQ8N3R3 496 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 TEX19Q8NA77 164 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 HIST1H2AHQ96KK5 128 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 CCDC138Q96M89 665 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 GBP5Q96PP8 586 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 ZNF382Q96SR6 550 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 HIST1H2AJQ99878 128 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 EBF4Q9BQW3 602 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 H2AFJQ9BTM1 129 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 ACAT2Q9BWD1 397 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 TMEM120AQ9BXJ8 343 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 EML4Q9HC35 981 aaKnown RBP15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 WWOXQ9NZC7 414 aa15.3■□□□□ 0.04
SRGAP2C-201ENST00000304465 A0A0G2JND7 137 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 A0A1B0GX78 115 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 K7EPI3 171 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 SRPX2O60687 465 aaPredicted RBP15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 STK16O75716 305 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 DNAJB5O75953 348 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 CCNDBP1O95273 360 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 SLC16A8O95907 504 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 CTSBP07858 339 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 OTX2P32243 289 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 FOXA1P55317 472 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 CHAF1BQ13112 559 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 TRAF3Q13114 568 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 GTF2H2Q13888 395 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 FASTKQ14296 549 aaKnown RBP15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 SLC9A5Q14940 896 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 FAM214AQ32MH5 1076 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 VWA5B1Q5TIE3 1220 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 FAM69BQ5VUD6 431 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 YOD1Q5VVQ6 348 aaPredicted RBP15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 ZNF385CQ66K41 422 aaPredicted RBP15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 GTF2H2CQ6P1K8 395 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 EPGNQ6UW88 154 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 MED25Q71SY5 747 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 LRRC56Q8IYG6 542 aaPredicted RBP15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 TEX9Q8N6V9 391 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 OR52B6Q8NGF0 335 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 OR2A1Q8NGT9 310 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 OR56A3Q8NH54 315 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 IP6K3Q96PC2 410 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 SIKE1Q9BRV8 207 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 SLC25A23Q9BV35 468 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 MRPS30Q9NP92 439 aaKnown RBP15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 PTRH2Q9Y3E5 179 aaKnown RBP15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 TRAF6Q9Y4K3 522 aa15.29■□□□□ 0.04
SRGAP2C-201ENST00000304465 PYCARD-AS1I3L0S3 204 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 PEX12O00623 359 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 HDAC3O15379 428 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 PRAMEF4O60810 478 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 ESRRBO95718 433 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 MLYCDO95822 493 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 ERGP11308 486 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 IDH3AP50213 366 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 HK2P52789 917 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 ARFIP2P53365 341 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 PNLIPRP1P54315 467 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 VSX2P58304 361 aaPredicted RBP15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 KCNC4Q03721 635 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 KLRB1Q12918 225 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 SSPNQ14714 243 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 THEMIS2Q5TEJ8 643 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 PRAMEF9Q5VWM5 478 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 CPZQ66K79 652 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 AGTRAPQ6RW13 159 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 SUSD1Q6UWL2 747 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 LRRC70Q7Z2Q7 622 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 TMEM102Q8N9M5 508 aaPredicted RBP15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 ADAMTS17Q8TE56 1095 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 ZNF480Q8WV37 535 aa15.28■□□□□ 0.04
SRGAP2C-201ENST00000304465 DPH7Q9BTV6 452 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms