RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PCM1Q15154 2024 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 PLD2O14939 933 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 ENTPD6O75354 484 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 CLDN7O95471 211 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 ITGALP20701 1170 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 ACSM2AQ08AH3 577 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 TUSC3Q13454 348 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 LRRC73Q5JTD7 316 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 ACSM2BQ68CK6 577 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 TMIGD1Q6UXZ0 262 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF367Q7RTV3 350 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 CELF5Q8N6W0 485 aaKnown RBP14.12□□□□□ -0.15
COL6A2-201ENST00000300527 DACT3Q96B18 629 aaPredicted RBP14.12□□□□□ -0.15
COL6A2-201ENST00000300527 PKMYT1Q99640 499 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 UCKL1Q9NWZ5 548 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 TMEM161AQ9NX61 479 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 FNIP2Q9P278 1114 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 YARS2Q9Y2Z4 477 aaKnown RBP14.12□□□□□ -0.15
COL6A2-201ENST00000300527 A3GALT2U3KPV4 340 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 PSIP1O75475 530 aaKnown RBP14.12□□□□□ -0.15
COL6A2-201ENST00000300527 HIST1H2AGP0C0S8 130 aaPredicted RBP14.12□□□□□ -0.15
COL6A2-201ENST00000300527 HIST1H2ADP20671 130 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 MAPK1P28482 360 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 EFR3AQ14156 821 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 CCL14Q16627 93 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 CTXN3Q4LDR2 81 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 TRIQKQ629K1 86 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 ADNP2Q6IQ32 1131 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 CARNMT1Q8N4J0 409 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 C19orf18Q8NEA5 215 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 OR4A15Q8NGL6 344 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 NFKBIDQ8NI38 313 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 HIST1H2AHQ96KK5 128 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 C7orf34Q96L11 122 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 HIST1H2AJQ99878 128 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 H2AFJQ9BTM1 129 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 PDFQ9HBH1 243 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 TRPS1Q9UHF7 1281 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 PADI3Q9ULW8 664 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 PCDHGB2Q9Y5G2 931 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 MN1Q10571 1320 aaPredicted RBP14.12□□□□□ -0.15
COL6A2-201ENST00000300527 NINQ8N4C6 2090 aa14.12□□□□□ -0.15
COL6A2-201ENST00000300527 B4DXG7 233 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 K7ERQ8 282 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 ADAMDEC1O15204 470 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 MTX2O75431 263 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 OR2B3O76000 313 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 CLCN4P51793 760 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 IRF8Q02556 426 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 CHRNA6Q15825 494 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 YIF1BQ5BJH7 314 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 ERICH5Q6P6B1 374 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF852Q6ZMS4 543 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 PLPP6Q8IY26 295 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 RBFAQ8N0V3 343 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 ZFP41Q8N8Y5 198 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 HCAR2Q8TDS4 363 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 RASSF5Q8WWW0 418 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 C1GALT1C1Q96EU7 318 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 MED8Q96G25 268 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 CRELD1Q96HD1 420 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 MED30Q96HR3 178 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 DOHHQ9BU89 302 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 DUSP26Q9BV47 211 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 P2RY12Q9H244 342 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 TRIM45Q9H8W5 580 aaPredicted RBP14.11□□□□□ -0.15
COL6A2-201ENST00000300527 RNF121Q9H920 327 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 NPAP1Q9NZP6 1156 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 SSR3Q9UNL2 185 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 MAN2B2Q9Y2E5 1009 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 POFUT2Q9Y2G5 429 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 PCDHGA2Q9Y5H1 932 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 TRPV2Q9Y5S1 764 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 V9GYH0 126 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 MAPKAPK2P49137 400 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 MRPL28Q13084 256 aaKnown RBP14.11□□□□□ -0.15
COL6A2-201ENST00000300527 CDH18Q13634 790 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 TATDN3Q17R31 274 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 COX20Q5RI15 118 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 IGLV3-10A0A075B6K4 115 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 FAM240BA0A1B0GVZ2 78 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 SAP18O00422 153 aaKnown RBP14.11□□□□□ -0.15
COL6A2-201ENST00000300527 MRPS14O60783 128 aaKnown RBP14.11□□□□□ -0.15
COL6A2-201ENST00000300527 SDHBP21912 280 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 GPC1P35052 558 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 FCHO2Q0JRZ9 810 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 TTLL9Q3SXZ7 439 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 TYW3Q6IPR3 259 aaKnown RBP14.11□□□□□ -0.15
COL6A2-201ENST00000300527 CD300LGQ6UXG3 332 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 SYT14Q8NB59 555 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 C11orf65Q8NCR3 313 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 ATP6V1C2Q8NEY4 427 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 OPALINQ96PE5 141 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 HDHD5Q9BXW7 423 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 SRRQ9GZT4 340 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 IL17CQ9P0M4 197 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 PCDHB1Q9Y5F3 818 aa14.11□□□□□ -0.15
COL6A2-201ENST00000300527 B4GALT3O60512 393 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 TPST2O60704 377 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 UGT2B17O75795 530 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms