RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 KIR2DS5A0A0G2JLQ3 304 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 A0A0G2JNG1 304 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 GNG14A0A1W2PPG7 69 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 KIR2DS3K7RE56 304 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 SAP18O00422 153 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 BTN3A3O00478 584 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 AXIN1O15169 862 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 OR1F1O43749 312 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 LCMT2O60294 686 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 DFNA5O60443 496 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 SCN2BO60939 215 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 CELA2BP08218 269 aaPredicted RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 COX7A2P14406 83 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 CD38P28907 300 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 HOXD12P35452 270 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 WNT3P56703 355 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 RACK1P63244 317 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 RPL6Q02878 288 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 KIR2DS5Q14953 304 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 FXNQ16595 210 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 PGS1Q32NB8 556 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 OR4F3Q6IEY1 312 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 ZNF425Q6IV72 752 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 TTLQ8NG68 377 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 OR7A2PQ8NGA2 310 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 ZUFSPQ96AP4 578 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 REXO4Q9GZR2 422 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 MUC13Q9H3R2 512 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 AHSPQ9NZD4 102 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 DNAJA2O60884 412 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 CLEC3AO75596 197 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 C8BP07358 591 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 DCNP07585 359 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 CTSEP14091 401 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 GSTM2P28161 218 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 PTPN6P29350 595 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 HPCAL1P37235 193 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 CYP4F2P78329 520 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 PLIN5Q00G26 463 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 SELPLGQ14242 412 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 GPR18Q14330 331 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 HKDC1Q2TB90 917 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 RUNDC3AQ59EK9 446 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 ZFP1Q6P2D0 407 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 SLC36A4Q6YBV0 504 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 ADCK2Q7Z695 626 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 TAF8Q7Z7C8 310 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 PTRH1Q86Y79 214 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 TRIM48Q8IWZ4 208 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 FAM20CQ8IXL6 584 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 FLVCR1-AS1Q8TAF5 88 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 CREB3L4Q8TEY5 395 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 SLC22A18Q96BI1 424 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 MPP4Q96JB8 637 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 SPACA7Q96KW9 195 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 ZNF184Q99676 751 aaPredicted RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 DPH7Q9BTV6 452 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 ZNF717Q9BY31 904 aaPredicted RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 MYNNQ9NPC7 610 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 FAM120CQ9NX05 1096 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 CPNE7Q9UBL6 633 aa14.87□□□□□ -0.03
LSM6-201ENST00000296581 EXO1Q9UQ84 846 aaKnown RBP14.87□□□□□ -0.03
LSM6-201ENST00000296581 ISM1B1AKI9 464 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 PLPP1O14494 284 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 VIPP01282 170 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 PABPC4LP0CB38 370 aaKnown RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 GRK3P35626 688 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 PSMD7P51665 324 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 ATXN3P54252 364 aaPredicted RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 KIR2DS3Q14952 304 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 KIAA1614Q5VZ46 1190 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 MAMSTRQ6ZN01 415 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 RNF111Q6ZNA4 994 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 DHFR2Q86XF0 187 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 PLD3Q8IV08 490 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 CDC26Q8NHZ8 85 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 PATE1Q8WXA2 126 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 COQ8BQ96D53 544 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 LRRC61Q9BV99 259 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 APOBEC3BQ9UH17 382 aaKnown RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 ATP6V1HQ9UI12 483 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 MUTYHQ9UIF7 546 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 SNX7Q9UNH6 387 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 BTBD3Q9Y2F9 522 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 TCRBV3S1A0A5B6 114 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 GABRR3A8MPY1 467 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 CSF2P04141 144 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 PIM1P11309 404 aaPredicted RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 NME1P15531 152 aaKnown RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 JUNDP17535 347 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 HTR1EP28566 365 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 BCL6P41182 706 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 TRPC1P48995 793 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 MTPNP58546 118 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 MRPS22P82650 360 aaKnown RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 ZIC1Q15915 447 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 LCN8Q6JVE9 175 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 KBTBD2Q8IY47 623 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 NAGSQ8N159 534 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 C1orf216Q8TAB5 229 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms