RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ERVK-18Q9QC07 812 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 SAMD4AQ9UPU9 718 aaKnown RBP11.29□□□□□ -0.6
RHO-201ENST00000296271 WDR37Q9Y2I8 494 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 DYRK1BQ9Y463 629 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 TESMINQ9Y4I5 508 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 DOCK8Q8NF50 2099 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 M0R129 80 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 PCDH8O95206 1070 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 TFPTP0C1Z6 253 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 FCARP24071 287 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 PLA2G16P53816 162 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 HPCAP84074 193 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 SLC5A12Q1EHB4 618 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 WSCD2Q2TBF2 565 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 PIP5KL1Q5T9C9 394 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 TTC23Q5W5X9 447 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 SHQ1Q6PI26 577 aaKnown RBP11.29□□□□□ -0.6
RHO-201ENST00000296271 NXPE4Q6UWF7 544 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 CBLL1Q75N03 491 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 OLIG3Q7RTU3 272 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 RNF130Q86XS8 419 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 ANKRD53Q8N9V6 530 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 OR13F1Q8NGS4 319 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 HERVK_113Q902F9 699 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 SMARCD2Q92925 531 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 COQ8BQ96D53 544 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 KXD1Q9BQD3 176 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 SLC35A5Q9BS91 424 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 FAF1Q9UNN5 650 aaPredicted RBP11.29□□□□□ -0.6
RHO-201ENST00000296271 LAMA1P25391 3075 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 MUC22E2RYF6 1773 aaPredicted RBP11.29□□□□□ -0.6
RHO-201ENST00000296271 ATG2AQ2TAZ0 1938 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 H7BY64 318 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 QSOX1O00391 747 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 LINC01565O15544 149 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 CPNE6O95741 557 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 PAK4O96013 591 aaPredicted RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 FURINP09958 794 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 DCKP27707 260 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 ALDH4A1P30038 563 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 LBX1P52954 281 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 SEC13P55735 322 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 ZNF763Q0D2J5 394 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 C2orf27AQ580R0 203 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 AP1ARQ63HQ0 302 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 EIF3MQ7L2H7 374 aaKnown RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 B3GNT8Q7Z7M8 397 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 ADGRF3Q8IZF5 1079 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 PIK3C3Q8NEB9 887 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 TMIEQ8NEW7 156 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 OR2L2Q8NH16 312 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 DNAJB8Q8NHS0 232 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 SPPL2AQ8TCT8 520 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 WFIKKN2Q8TEU8 576 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 JPH3Q8WXH2 748 aaPredicted RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 SUSD6Q92537 303 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 TFGQ92734 400 aaPredicted RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 HSPBAP1Q96EW2 488 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 PRAP1Q96NZ9 151 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 REEP4Q9H6H4 257 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 SLAMF7Q9NQ25 335 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 CCDC177Q9NQR7 707 aaPredicted RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 RAD18Q9NS91 495 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 THUMPD1Q9NXG2 353 aaKnown RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 SLC6A14Q9UN76 642 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 COL4A3Q01955 1670 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 EPOPA6NHQ4 379 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 PSMD11O00231 422 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 ABCB7O75027 752 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 VIPP01282 170 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 RRM2P31350 389 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 GJA4P35212 333 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 SOAT1P35610 550 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 LSM3P62310 102 aaKnown RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 AQP6Q13520 282 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 FGL2Q14314 439 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 C11orf91Q3C1V1 193 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 SPIN4Q56A73 249 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 BROXQ5VW32 411 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 HMGN2P46Q86SG4 172 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 FAM124AQ86V42 546 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 HORMAD1Q86X24 394 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 FAM9CQ8IZT9 166 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 CXorf40AQ8TE69 158 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 OTUB1Q96FW1 271 aaPredicted RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 KCNC2Q96PR1 638 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 TMEM106CQ9BVX2 250 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 AMBNQ9NP70 447 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 RHCGQ9UBD6 479 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 C3orf18Q9UK00 162 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 YBX2Q9Y2T7 364 aaKnown RBP11.28□□□□□ -0.6
RHO-201ENST00000296271 SNX8Q9Y5X2 465 aa11.28□□□□□ -0.6
RHO-201ENST00000296271 C5orf67F2Z3F1 127 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms