RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TSC22D4Q9Y3Q8 395 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 MAU2Q9Y6X3 613 aa8.68□□□□□ -1.02
HMGN1-201ENST00000288344 UBR5O95071 2799 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 A0A0A6YYC8 382 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 CDC14CA4D256 554 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 LRIT2A6NDA9 550 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 LRRC14BA6NHZ5 514 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 POC1B-GALNT4F8VUJ3 575 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 I3L1I5 382 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 MASP2O00187 686 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 E2F3O00716 465 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 OR1F1O43749 312 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 GALR3O60755 368 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 DNAJB5O75953 348 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 WDR47O94967 919 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 B3GALT4O96024 378 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 STATHP02808 62 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 SERPINA6P08185 405 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 INHBAP08476 426 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 CCR10P46092 362 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 SERPINB8P50452 374 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 KLC1Q07866 573 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 Q0VFX4 171 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 CDC16Q13042 620 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 TSTA3Q13630 321 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 DOC2AQ14183 400 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 SYT16Q17RD7 645 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 FAM83EQ2M2I3 478 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 CPZQ66K79 652 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 UBE3DQ7Z6J8 389 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 MRGPREQ86SM8 312 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 TBC1D1Q86TI0 1168 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 ATCAYQ86WG3 371 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 ZC3H7AQ8IWR0 971 aaKnown RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 LAS2Q8IYD9 372 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 METTL27Q8N6F8 245 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 TTC29Q8NA56 475 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 CAMKVQ8NCB2 501 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 OR9A4Q8NGU2 314 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 PSMF1Q92530 271 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 N4BP2L2Q92802 583 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 ABHD17AQ96GS6 310 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 TSNARE1Q96NA8 513 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 QRFPRQ96P65 431 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 SCN2AQ99250 2005 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 CAPS2Q9BXY5 557 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 DRC3Q9H069 523 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 ING2Q9H160 280 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 LANCL2Q9NS86 450 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 TXLNGQ9NUQ3 528 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 ABCF3Q9NUQ8 709 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 DNAJC11Q9NVH1 559 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF225Q9UK10 706 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 RAB21Q9UL25 225 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 CDC14AQ9UNH5 594 aa8.67□□□□□ -1.02
HMGN1-201ENST00000288344 PTRH2Q9Y3E5 179 aaKnown RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 PCDHGA9Q9Y5G4 932 aaKnown RBP8.67□□□□□ -1.02
HMGN1-201ENST00000288344 A0A1B0GTL3 188 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 A0A1W2PPM1 405 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 NCF1BA6NI72 391 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 NCF1CA8MVU1 366 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 FOXO6A8MYZ6 492 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 C9J4A7 227 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 K7EPI3 171 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 OR7A17O14581 309 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 JRKO75564 520 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 CLEC3AO75596 197 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 KRT38O76015 456 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 SIX3O95343 332 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 NUDT17P0C025 328 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 PIM1P11309 404 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 NCF1P14598 390 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 HNRNPH1P31943 449 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 GLRBP48167 497 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 ALDH18A1P54886 795 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 MAT1AQ00266 395 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 KCNAB2Q13303 367 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 ATP1A4Q13733 1029 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 C11orf91Q3C1V1 193 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 DCAF10Q5QP82 559 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 TCTN3Q6NUS6 607 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 TMIGD1Q6UXZ0 262 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 RAPH1Q70E73 1250 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 LRRC70Q7Z2Q7 622 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 TMEM102Q8N9M5 508 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 L3MBTL4Q8NA19 623 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 PLPP5Q8NEB5 264 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 OR11G2Q8NGC1 345 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF473Q8WTR7 871 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 RERGQ96A58 199 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 ALKBH8Q96BT7 664 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 MS4A6EQ96DS6 147 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 MTBPQ96DY7 904 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 CABS1Q96KC9 395 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 IMMP1LQ96LU5 166 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 SMAD5Q99717 465 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 EGFL8Q99944 293 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 WDR77Q9BQA1 342 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 AIF1LQ9BQI0 150 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms