RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 FOLH1Q04609 750 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 CEBPEQ15744 281 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 TTLL9Q3SXZ7 439 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 EMC4Q5J8M3 183 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 CAPN13Q6MZZ7 669 aaPredicted RBP10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 ARHGAP11AQ6P4F7 1023 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 CENPUQ71F23 418 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 OR52N2Q8NGI0 321 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 C16orf52Q8NHV5 167 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 SLC13A3Q8WWT9 602 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 TBC1D20Q96BZ9 403 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 PANX2Q96RD6 677 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 TCF12Q99081 682 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 KIFC1Q9BW19 673 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 LIME1Q9H400 295 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 DNAJB12Q9NXW2 375 aaKnown RBP10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 BFARQ9NZS9 450 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 SLC22A7Q9Y694 548 aa10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 PRRC2AP48634 2157 aaKnown RBP10.04□□□□□ -0.8
NSMCE2-201ENST00000287437 A0A1B0GTL3 188 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 SAGE2PA6NJ88 616 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 GFYI3L273 518 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 CDK2AP1O14519 115 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 FCHO1O14526 889 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 CHST10O43529 356 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 ZBTB14O43829 449 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 KLK8O60259 260 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 GALR3O60755 368 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 SLC35G6P0C7Q6 338 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 MPC1LP0DKB6 136 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 JAK1P23458 1154 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 NPY2RP49146 381 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 BTG2P78543 158 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 FOXD4Q12950 439 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 HERC3Q15034 1050 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 RPS6KA1Q15418 735 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 KCTD19Q17RG1 926 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 DEFB134Q4QY38 66 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 RAD9BQ6WBX8 426 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 MBOAT1Q6ZNC8 495 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 UBE2R2Q712K3 238 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 PIWIL4Q7Z3Z4 852 aaKnown RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 MDGA2Q7Z553 956 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 CILP2Q8IUL8 1156 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 CYP4Z2PQ8N1L4 340 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 ZFP62Q8NB50 900 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 ZNF740Q8NDX6 193 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 OR5M3Q8NGP4 307 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 NINJ1Q92982 152 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 HES6Q96HZ4 224 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 PTCHD1Q96NR3 888 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 DEFB126Q9BYW3 111 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 FRMD8P1Q9BZ68 369 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 DEFB127Q9H1M4 99 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 EIF2B3Q9NR50 452 aaKnown RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 SCN3AQ9NY46 2000 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 DRG1Q9Y295 367 aaKnown RBP10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 MED16Q9Y2X0 877 aa10.03□□□□□ -0.8
NSMCE2-201ENST00000287437 INTS1Q8N201 2190 aaKnown RBP10.02□□□□□ -0.8
NSMCE2-201ENST00000287437 FAM237BA0A1B0GVD1 139 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 TMEM200CA6NKL6 621 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 A8MUA0 341 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 NPIPA2E9PIF3 369 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 NPIPA3F8WFD2 350 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 NDUFS4O43181 175 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 CTAG2O75638 210 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 FAM155BO75949 473 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 CDH1P12830 882 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 MAOAP21397 527 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 MEF2AQ02078 507 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 HYAL2Q12891 473 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 SNTB1Q13884 538 aaKnown RBP10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 SEL1L2Q5TEA6 688 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 ZNF470Q6ECI4 717 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 KIAA0930Q6ICG6 404 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 NEPROQ6NW34 567 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 CYHR1Q6ZMK1 362 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 ACAD11Q709F0 780 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 KIAA1328Q86T90 577 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 C17orf64Q86WR6 236 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 ZZZ3Q8IYH5 903 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 CPNE9Q8IYJ1 553 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 CLYBLQ8N0X4 340 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 ARMC10Q8N2F6 343 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 AFAP1L2Q8N4X5 818 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 TMEM156Q8N614 296 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 MFSD9Q8NBP5 474 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 NFAM1Q8NET5 270 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 OR10Q1Q8NGQ4 319 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 ALKBH8Q96BT7 664 aaKnown RBP10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 GPR21Q99679 349 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 POLDIP3Q9BY77 421 aaKnown RBP10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 TRIM5Q9C035 493 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 ATG10Q9H0Y0 220 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 DLL4Q9NR61 685 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 PNPLA3Q9NST1 481 aa10.02□□□□□ -0.81
NSMCE2-201ENST00000287437 DEPPQ9NTK1 212 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms