RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PRAMEF25A6NGN4 478 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 UGDHO60701 494 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 ANXA8P13928 327 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 CASP3P42574 277 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 UGT2B15P54855 530 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 IFI44LQ53G44 452 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 CCBE1Q6UXH8 406 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 SPATC1Q76KD6 591 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 B3GNT7Q8NFL0 401 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 YIPF2Q9BWQ6 316 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 HOXD1Q9GZZ0 328 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 EHD1Q9H4M9 534 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 SUV39H2Q9H5I1 410 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF334Q9HCZ1 680 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 GPATCH2Q9NW75 528 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 PCDHGB6Q9Y5F9 930 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 ARHGEF33A8MVX0 844 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 J3KTA2 159 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 ABLIM3O94929 683 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 MED26O95402 600 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 SRCP12931 536 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 ASMTP46597 345 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 SPINT3P49223 89 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 SNRPD1P62314 119 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 NAE1Q13564 534 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 MICAQ29983 383 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 CCSMST1Q4G0I0 132 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 ANXA8L1Q5VT79 327 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 RGMBQ6NW40 437 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 GDPD3Q7L5L3 318 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 NLGN4XQ8N0W4 816 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 DEPDC4Q8N2C3 294 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 CLIP4Q8N3C7 705 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 DENND6BQ8NEG7 585 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 OR4K1Q8NGD4 311 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 ATL1Q8WXF7 558 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 TCF25Q9BQ70 676 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 B4GALT6Q9UBX8 382 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 PEX16Q9Y5Y5 336 aa12.73□□□□□ -0.37
SLC28A1-201ENST00000286749 TMEM202A6NGA9 273 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 PRRG1O14668 218 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 KMOO15229 486 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 ADRA2AP08913 450 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 MVDP53602 400 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 LIMK1P53667 647 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF33BQ06732 778 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 TP53BP2Q13625 1128 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 IRF3Q14653 427 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF385BQ569K4 471 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF648Q5T619 568 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 GRHL2Q6ISB3 625 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 CYP4Z2PQ8N1L4 340 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 CELF2-AS1Q8N7Q2 184 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 NFKBIDQ8NI38 313 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 GTPBP3Q969Y2 492 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 ECHDC3Q96DC8 303 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 OR4K3Q96R72 315 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 MCCC1Q96RQ3 725 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 KLHL3Q9UH77 587 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 CFAP20Q9Y6A4 193 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 NINQ8N4C6 2090 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 SCN5AQ14524 2016 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 A0A1W2PQ45 241 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 A0A1W2PQY0 241 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 OR2AG2A6NM03 316 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 H0YIV9 168 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 DYRK3O43781 588 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 SSX4O60224 188 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 KIAA0513O60268 411 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 HBA1P69905 142 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 MED22Q15528 200 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 AGTRAPQ6RW13 159 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 BBS7Q8IWZ6 715 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 CAPSLQ8WWF8 208 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 CLP1Q92989 425 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 SCAMP4Q969E2 229 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 COQ8BQ96D53 544 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 EHD3Q9NZN3 535 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF282Q9UDV7 671 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 ACSL6Q9UKU0 697 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 EXO1Q9UQ84 846 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 SNX8Q9Y5X2 465 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 AP1M2Q9Y6Q5 423 aa12.72□□□□□ -0.37
SLC28A1-201ENST00000286749 PCDH17O14917 1159 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 EIF2S1P05198 315 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 OLR1P78380 273 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 SCARB2Q14108 478 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 DMC1Q14565 340 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 TSTQ16762 297 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 CAMKMTQ7Z624 323 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 FAM217AQ8IXS0 508 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 HUS1BQ8NHY5 278 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 CRELD1Q96HD1 420 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 FAM129BQ96TA1 746 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 KCNS3Q9BQ31 491 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms