RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MAP7Q14244 749 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 VMACQ2NL98 169 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 MTSS1LQ765P7 747 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 SPRED1Q7Z699 444 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 TRIML2Q8N7C3 387 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 HMGB4Q8WW32 186 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 RMND5BQ96G75 393 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-201ENST00000279247 HAUS8Q9BT25 410 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 SLC24A3Q9HC58 644 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 SCHIP1Q9P0W5 487 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-201ENST00000279247 WASHC1A8K0Z3 465 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 PLRG1O43660 514 aaKnown RBP17.18■□□□□ 0.34
CAPN1-201ENST00000279247 LCMT2O60294 686 aaKnown RBP17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TFAP2AP05549 437 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ETFAP13804 333 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ACPPP15309 386 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 HOXB9P17482 250 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ARSFP54793 590 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TXNL4AP83876 142 aaKnown RBP17.18■□□□□ 0.34
CAPN1-201ENST00000279247 LCTLQ6UWM7 567 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 WASH2PQ6VEQ5 465 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TMEM179BQ7Z7N9 219 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 SLC44A2Q8IWA5 706 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-201ENST00000279247 METTL25Q8N6Q8 603 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 SMPDL3AQ92484 453 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 AIF1LQ9BQI0 150 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 OLAHQ9NV23 265 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 PCDHB11Q9Y5F2 797 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 SERTM1A2A2V5 107 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 C2CD4DB7Z1M9 353 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 NPIPB8E9PQR5 432 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 PLPP1O14494 284 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ALBP02768 609 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 PHEXP78562 749 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 NADK2Q4G0N4 442 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TPRG1LQ5T0D9 272 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TMEM92Q6UXU6 159 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TMEM145Q8NBT3 493 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TSPAN14Q8NG11 270 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 CAMK1GQ96NX5 476 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TSC22D3Q99576 134 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 DMDP11532 3685 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 HS6ST1O60243 411 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 PRMT3O60678 531 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 EML2O95834 649 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 TNFRSF1BP20333 461 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 FAM129CQ86XR2 697 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 PTOV1Q86YD1 416 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ZDHHC21Q8IVQ6 265 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 HOMEZQ8IX15 550 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 KLHDC8AQ8IYD2 350 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ZZZ3Q8IYH5 903 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 OXR1Q8N573 874 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 UCN3Q969E3 161 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 NMD3Q96D46 503 aaKnown RBP17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ANKRD60Q9BZ19 345 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 PRO3102Q9H379 93 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 FAF1Q9UNN5 650 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-201ENST00000279247 ABCG2Q9UNQ0 655 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 MYRFQ9Y2G1 1151 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 SCN2AQ99250 2005 aa17.18■□□□□ 0.34
CAPN1-201ENST00000279247 CHI3L1P36222 383 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-201ENST00000279247 CCR3P51677 355 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 CCR8P51685 355 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 MAPK12P53778 367 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 RPS26P62854 115 aaKnown RBP17.17■□□□□ 0.34
CAPN1-201ENST00000279247 MPEG1Q2M385 716 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 TMEM259Q4ZIN3 620 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 GALNT5Q7Z7M9 940 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 AMER3Q8N944 861 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 SETD7Q8WTS6 366 aaKnown RBP17.17■□□□□ 0.34
CAPN1-201ENST00000279247 PYURFQ96I23 114 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 MRGPRX1Q96LB2 322 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 SLC35A5Q9BS91 424 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 BTBD1Q9H0C5 482 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 EXD2Q9NVH0 621 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 A0A1W2PPV9 198 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 GLOD5A6NK44 160 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 FOXE1O00358 373 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-201ENST00000279247 NARSO43776 548 aaKnown RBP17.17■□□□□ 0.34
CAPN1-201ENST00000279247 PTX3P26022 381 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-201ENST00000279247 GRSF1Q12849 480 aaKnown RBP eCLIP17.17■□□□□ 0.34
CAPN1-201ENST00000279247 CYBRD1Q53TN4 286 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 ZNF542PQ5EBM4 170 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 OR4E2Q8NGC2 313 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 OR52E1Q8NGJ3 308 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 DNAJB8Q8NHS0 232 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 HHIPQ96QV1 700 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 C17orf62Q9BQA9 187 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 SLC6A16Q9GZN6 736 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 YY1AP1Q9H869 796 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 PNPLA3Q9NST1 481 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 CD207Q9UJ71 328 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 ACSL5Q9ULC5 683 aa17.17■□□□□ 0.34
CAPN1-201ENST00000279247 TCRBV21S2A2A0A5A6 115 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 PRKRAO75569 313 aaKnown RBP17.16■□□□□ 0.34
CAPN1-201ENST00000279247 KLHL18O94889 574 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 H6PDO95479 791 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 TBX6O95947 436 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms