RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 IL20RBQ6UXL0 311 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PAQR9Q6ZVX9 377 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PRSS45Q7RTY3 260 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 GPR180Q86V85 440 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 CDR2LQ86X02 465 aaPredicted RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 CAMK1DQ8IU85 385 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 AQP12AQ8IXF9 295 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 OFCC1Q8IZS5 231 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 CFAP52Q8N1V2 620 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 RNF10Q8N5U6 811 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 COMMD1Q8N668 190 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PSD4Q8NDX1 1056 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 TRPV1Q8NER1 839 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 SLC2A14Q8TDB8 520 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 TAS1R2Q8TE23 839 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 DQX1Q8TE96 717 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 C2CD4CQ8TF44 421 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 TMEM125Q96AQ2 219 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 LINGO1Q96FE5 620 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 CDKN2AIPNLQ96HQ2 116 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 MAGED4Q96JG8 741 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 VN1R3Q9BXE9 311 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PPIL3Q9H2H8 161 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 SLC38A10Q9HBR0 1119 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 TREM1Q9NP99 234 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 IL26Q9NPH9 171 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 KLHL1Q9NR64 748 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 IL17RBQ9NRM6 502 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 DONSONQ9NYP3 566 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 FLRT1Q9NZU1 646 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 LARSQ9P2J5 1176 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 COPG2Q9UBF2 871 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 SERGEFQ9UGK8 458 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 GPR132Q9UNW8 380 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 FOXA2Q9Y261 457 aaPredicted RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 DTX4Q9Y2E6 619 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PADI2Q9Y2J8 665 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 DOCK1Q14185 1865 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 ZMYM6O95789 1325 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 CCDC171Q6TFL3 1326 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 FAM240BA0A1B0GVZ2 78 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 A0A1W2PPW3 197 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 HEATR9A2RTY3 570 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ANKRD61A6NGH8 418 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 KLRF2D3W0D1 207 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 NPIPB11E5RHQ5 1161 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 E7ENX8 843 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 F5H697 171 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 PTGESO14684 152 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 NDUFS4O43181 175 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TSPAN1O60635 241 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 FCGR3BO75015 233 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ATP9AO75110 1047 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 VPS26AO75436 327 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 CRTAPO75718 401 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 RAD51DO75771 328 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TJP3O95049 919 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 HIST1H2ABP04908 130 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 HMBSP08397 361 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 CYBAP13498 195 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 PRKACAP17612 351 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 HIST1H2ADP20671 130 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 EDN2P20800 178 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ITGB8P26012 769 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 PSMB4P28070 264 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 PRDX6P30041 224 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ATP5C1P36542 298 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 SLC1A3P43003 542 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 MAGEB1P43366 347 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ANXA11P50995 505 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 ARHGDIBP52566 201 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 VAV2P52735 878 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 HNRNPKP61978 463 aaKnown RBP eCLIP4.37□□□□□ -1.71
CD44-202ENST00000278385 XIAPP98170 497 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 HSF2Q03933 536 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 EGR4Q05215 589 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 DMPKQ09013 629 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 E2F2Q14209 437 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 STXBP2Q15833 593 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TPD52L1Q16890 204 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 FAM83EQ2M2I3 478 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 EDRF1Q3B7T1 1238 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 SPANXN2Q5MJ10 180 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 PRAMEF19Q5SWL8 479 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 LRRC38Q5VT99 294 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 B3GNTL1Q67FW5 361 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 IGFL4Q6B9Z1 124 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 SP5Q6BEB4 398 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 GRHL2Q6ISB3 625 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TAPT1Q6NXT6 567 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 CWC27Q6UX04 472 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 KDM7AQ6ZMT4 941 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 BZW1Q7L1Q6 419 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 HIST3H2AQ7L7L0 130 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TRMT11Q7Z4G4 463 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 ZNF589Q86UQ0 364 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 VRK3Q8IV63 474 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms