RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ZNF583Q96ND8 569 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 COL21A1Q96P44 957 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 SLC38A2Q96QD8 506 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 MGLLQ99685 303 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 GSTO2Q9H4Y5 243 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 TAS2R16Q9NYV7 291 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 SPASTQ9UBP0 616 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 GLYATL1P3A0A0U1RQE8 302 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 TERTO14746 1132 aaKnown RBP8.9□□□□□ -0.99
PDGFC-201ENST00000274071 KDM4BO94953 1096 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 RASGRP1O95267 797 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 CYP17A1P05093 508 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 RHCEP18577 417 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 POU3F2P20265 443 aaPredicted RBP8.9□□□□□ -0.99
PDGFC-201ENST00000274071 DNASE1P24855 282 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 PGDP52209 483 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 CASP6P55212 293 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 KIAA1024LP59773 190 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 RAB10P61026 200 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 RNF4P78317 190 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 ERV3-1Q14264 604 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 FAM76BQ5HYJ3 339 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 TRMT1LQ7Z2T5 733 aaKnown RBP8.9□□□□□ -0.99
PDGFC-201ENST00000274071 SAMD7Q7Z3H4 446 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 HSD17B13Q7Z5P4 300 aaPredicted RBP8.9□□□□□ -0.99
PDGFC-201ENST00000274071 MFSD6LQ8IWD5 586 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 DNAJC22Q8N4W6 341 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 TMEM145Q8NBT3 493 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 IPMKQ8NFU5 416 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 GLYATL2Q8WU03 294 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 HTR3CQ8WXA8 447 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 KIF12Q96FN5 646 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 SFXN2Q96NB2 322 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 C19orf43Q9BQ61 176 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 H2AFJQ9BTM1 129 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 SARGQ9BW04 601 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 RHOJQ9H4E5 214 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 KRT84Q9NSB2 600 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 THUMPD1Q9NXG2 353 aaKnown RBP8.9□□□□□ -0.99
PDGFC-201ENST00000274071 LEF1Q9UJU2 399 aaPredicted RBP8.9□□□□□ -0.99
PDGFC-201ENST00000274071 SAMHD1Q9Y3Z3 626 aaKnown RBP8.9□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF451Q9Y4E5 1061 aa8.9□□□□□ -0.99
PDGFC-201ENST00000274071 POM121BA6NF01 834 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 C2orf74A8MZ97 194 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 PIP5K1BO14986 540 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 LY86O95711 162 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 S100A8P05109 93 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 URODP06132 367 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 OR56A5P0C7T3 313 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 RFC3P40938 356 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ARSDP51689 593 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 CLCN3P51790 818 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 VSX2P58304 361 aaPredicted RBP8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF280AP59817 542 aaPredicted RBP8.89□□□□□ -0.99
PDGFC-201ENST00000274071 UFM1P61960 85 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 SPP2Q13103 211 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 TNFAIP1Q13829 316 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 MED22Q15528 200 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 PFKFB4Q16877 469 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 CARD16Q5EG05 197 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF648Q5T619 568 aaPredicted RBP8.89□□□□□ -0.99
PDGFC-201ENST00000274071 BCL2L15Q5TBC7 163 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 SCYL2Q6P3W7 929 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 TMEM88Q6PEY1 159 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 C3P1Q6ZMU1 363 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ELP5Q8TE02 316 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 CYP2S1Q96SQ9 504 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 RIT2Q99578 217 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 PDCD10Q9BUL8 212 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 EIF2B3Q9NR50 452 aaKnown RBP8.89□□□□□ -0.99
PDGFC-201ENST00000274071 MYEF2Q9P2K5 600 aaKnown RBP8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ASH2LQ9UBL3 628 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF490Q9ULM2 529 aaPredicted RBP8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ASB4Q9Y574 426 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 LOC390937A0A1W2PQ73 354 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 TMEM150BA6NC51 233 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 LZTS3O60299 673 aaPredicted RBP8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ATG7O95352 703 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 VIPP01282 170 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 LBPP18428 481 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 STOMP27105 288 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 PSMB4P28070 264 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 NUDT6P53370 316 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 FOXA1P55317 472 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 SH3BP2P78314 561 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 MXD1Q05195 221 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 SEC23BQ15437 767 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 MICBQ29980 383 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 C9orf152Q5JTZ5 239 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 FAM74A1Q5RGS3 127 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 KIAA0319Q5VV43 1072 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 BICRALQ6AI39 1079 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 CYB5R2Q6BCY4 276 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 TRNP1Q6NT89 227 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 MIB1Q86YT6 1006 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 ADGRF3Q8IZF5 1079 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 COQ8AQ8NI60 647 aa8.89□□□□□ -0.99
PDGFC-201ENST00000274071 LGMNQ99538 433 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms