RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 M0R129 80 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 COCHO43405 550 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 OR6A2O95222 327 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 BCHEP06276 602 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 PCSK2P16519 638 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 TNFRSF1BP20333 461 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 GJA5P36382 358 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 CDKN1CP49918 316 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 AP1S2P56377 157 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 ARF5P84085 180 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 CREMQ03060 361 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 GNA13Q14344 377 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 PCBP2Q15366 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 KLHL22Q53GT1 634 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 Q6ZVU0 165 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 MMAAQ8IVH4 418 aaKnown RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 CHDHQ8NE62 594 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 FERD3LQ96RJ6 166 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 FAM129BQ96TA1 746 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 IL37Q9NZH6 218 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 NLKQ9UBE8 527 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 SPO11Q9Y5K1 396 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 ABHD14A-ACY1A0A1B0GW23 586 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CD247P20963 164 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ALDH3B2P48448 385 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CBLBQ13191 982 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 C22orf42Q6IC83 251 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 FAM171BQ6P995 826 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 TPRG1Q6ZUI0 275 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 LSMEM2Q8N112 164 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 NXPE1Q8N323 547 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 NETO1Q8TDF5 533 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 GEMIN6Q8WXD5 167 aaKnown RBP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 VMP1Q96GC9 406 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 OR51E2Q9H255 320 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 TREX1Q9NSU2 369 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 TMX2-CTNND1H3BSU7 103 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 PLD2O14939 933 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 PTTG1O95997 202 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 HTR1BP28222 390 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 HNMTP50135 292 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 GRIK2Q13002 908 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 LRRC70Q7Z2Q7 622 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CLEC14AQ86T13 490 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 DCAF4L2Q8NA75 395 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 GALNT6Q8NCL4 622 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 AKAP1Q92667 903 aaKnown RBP eCLIP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 RFKQ969G6 155 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 GPN1Q9HCN4 374 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 PAK6Q9NQU5 681 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 A0A0U1RQS6 177 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CA5AP35218 305 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ERVPABLB-1P60509 514 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 NFATC2Q13469 925 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CARD16Q5EG05 197 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 KCTD11Q693B1 232 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 SPATC1Q76KD6 591 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 FAM220AQ7Z4H9 259 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 DCP2Q8IU60 420 aaKnown RBP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF366Q8N895 744 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 RIOK2Q9BVS4 552 aaKnown RBP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 MND1Q9BWT6 205 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 UCK2Q9BZX2 261 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 SIAEQ9HAT2 523 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 PGAP2Q9UHJ9 254 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 HCN2Q9UL51 889 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 HCN4Q9Y3Q4 1203 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 GPSM3Q9Y4H4 160 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 AP1G1O43747 822 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 H1F0P07305 194 aaKnown RBP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CELP19835 753 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ACSL1P33121 698 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 RYKP34925 604 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 MAP2K3P46734 347 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 BIKQ13323 160 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 TUBB3Q13509 450 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 KANK2Q63ZY3 851 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 TPGS2Q68CL5 300 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ADGRD2Q7Z7M1 963 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 IQCHQ86VS3 1027 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CADM2Q8N3J6 435 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF461Q8TAF7 563 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 SNX33Q8WV41 574 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 CLIP3Q96DZ5 547 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ZCCHC3Q9NUD5 404 aaKnown RBP11.16□□□□□ -0.62
VPS33A-201ENST00000267199 ANKMY1Q9P2S6 941 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 DEC1Q9P2X7 70 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 PCTPQ9UKL6 214 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 GABRQQ9UN88 632 aa11.16□□□□□ -0.62
VPS33A-201ENST00000267199 RREB1Q92766 1687 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms