RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MAGEB17A8MXT2 336 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 H0YIG0 161 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 DSCR3O14972 297 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 NDUFS4O43181 175 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 FOXS1O43638 330 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 SCRG1O75711 98 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 MED26O95402 600 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF28P17035 718 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 STXBP1P61764 594 aaKnown RBP13.57□□□□□ -0.24
SSBP1-201ENST00000265304 IFT88Q13099 833 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 KHDRBS2Q5VWX1 349 aaKnown RBP13.57□□□□□ -0.24
SSBP1-201ENST00000265304 PRMT9Q6P2P2 845 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 ABHD17CQ6PCB6 329 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 CHSY3Q70JA7 882 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 UBE3DQ7Z6J8 389 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 KCT2Q8NC54 265 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 SRFBP1Q8NEF9 429 aaKnown RBP13.57□□□□□ -0.24
SSBP1-201ENST00000265304 OR2L5Q8NG80 312 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 PPP1R14CQ8TAE6 165 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 UTP15Q8TED0 518 aaKnown RBP13.57□□□□□ -0.24
SSBP1-201ENST00000265304 N4BP2L2Q92802 583 aaPredicted RBP13.57□□□□□ -0.24
SSBP1-201ENST00000265304 GAL3ST3Q96A11 431 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 QRFPRQ96P65 431 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 GBP5Q96PP8 586 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 KCNA7Q96RP8 456 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 SERPINI1Q99574 410 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF717Q9BY31 904 aaPredicted RBP13.57□□□□□ -0.24
SSBP1-201ENST00000265304 KLHL31Q9H511 634 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 ELOVL6Q9H5J4 265 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 ACTR5Q9H9F9 607 aaPredicted RBP13.57□□□□□ -0.24
SSBP1-201ENST00000265304 PRDM7Q9NQW5 492 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 CUTCQ9NTM9 273 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 PTPRQQ9UMZ3 2332 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 IGLV3-12A0A075B6K2 115 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 A0A1B0GX78 115 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 CPNE3O75131 537 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 LYPLA1O75608 230 aaPredicted RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 NSA2O95478 260 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 ETHE1O95571 254 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 PDYNP01213 254 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 ALOX12P18054 663 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 ITGAXP20702 1163 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 RBMS1P29558 406 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 HMOX2P30519 316 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 SLC5A2P31639 672 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 HNRNPH1P31943 449 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 RPL14P50914 215 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 NEK2P51955 445 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 HK2P52789 917 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 MAPK10P53779 464 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 SNRPNP63162 240 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 TBL3Q12788 808 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 ABRAXAS2Q15018 415 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 HERC3Q15034 1050 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 NDUFA9Q16795 377 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 XKR7Q5GH72 579 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 GALNT18Q6P9A2 607 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 Q6ZSR9 355 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 LRRC34Q8IZ02 419 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 DSELQ8IZU8 1212 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 TTC29Q8NA56 475 aaPredicted RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 FAM76AQ8TAV0 307 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 STON2Q8WXE9 905 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 GATA6Q92908 595 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 FAR2Q96K12 515 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 MTERF1Q99551 399 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 CTRCQ99895 268 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 TBCDQ9BTW9 1192 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 NDC1Q9BTX1 674 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 TUBB1Q9H4B7 451 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 LHX9Q9NQ69 397 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 FARSBQ9NSD9 589 aaKnown RBP13.56□□□□□ -0.24
SSBP1-201ENST00000265304 FOXJ2Q9P0K8 574 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 CDC14AQ9UNH5 594 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 TIMM22Q9Y584 194 aa13.56□□□□□ -0.24
SSBP1-201ENST00000265304 NUP210LQ5VU65 1888 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 FRYQ5TBA9 3013 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 DMXL2Q8TDJ6 3036 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 C4orf51C9J302 202 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 MEN1O00255 615 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF195O14628 629 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 TERTO14746 1132 aaKnown RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 FFAR3O14843 346 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 GPR42O15529 346 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 BRINP1O60477 761 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 GALR3O60755 368 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 STK17BO94768 372 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 HSPA4LO95757 839 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 SERPINB3P29508 390 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 BSGP35613 385 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 HTR6P50406 440 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 ATP1A2P50993 1020 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 RPS13P62277 151 aaKnown RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 PHEXP78562 749 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 TBC1D25Q3MII6 688 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 PRAMEF17Q5VTA0 474 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 TIPARPQ7Z3E1 657 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms