RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CHST8Q9H2A9 424 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 A0A0A6YYC8 382 aaPredicted RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 A0A0G2JN53 185 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 LOC101059948A0A1B0GTJ6 334 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 A0A1B0GX78 115 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 I3L1I5 382 aaPredicted RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 DNAJB13P59910 316 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 HYAL2Q12891 473 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 ZRSR2Q15696 482 aaKnown RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 TOR1AIP1Q5JTV8 583 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 CFAP157Q5JU67 520 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 FRMD7Q6ZUT3 714 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 MILR1Q7Z6M3 343 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 CT55Q8WUE5 264 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 KCNA7Q96RP8 456 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 PAIP2Q9BPZ3 127 aaKnown RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 LHX9Q9NQ69 397 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 LOC400499M0QZD8 3231 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 PTPRQQ9UMZ3 2332 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 ZNF860A6NHJ4 632 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 DSCR3O14972 297 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 TRIM13O60858 407 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 OTCP00480 354 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 BPGMP07738 259 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 EIF2S3P41091 472 aaKnown RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 STAT5AP42229 794 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 NEK2P51955 445 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 PCDH1Q08174 1060 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 LCP2Q13094 533 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 LAPTM5Q13571 262 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 MUM1Q2TAK8 710 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 LIPJQ5W064 366 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 TMEM214Q6NUQ4 689 aaKnown RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 LRRC34Q8IZ02 419 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 ESX1Q8N693 406 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 CDYL2Q8N8U2 506 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 L3MBTL4Q8NA19 623 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 OR9A4Q8NGU2 314 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 MTFMTQ96DP5 389 aaKnown RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 HBEGFQ99075 208 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 MTERF1Q99551 399 aaKnown RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 NTMT1Q9BV86 223 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 NLNQ9BYT8 704 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 TNFRSF12AQ9NP84 129 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 CROTQ9UKG9 612 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 ANKDD1BA6NHY2 528 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 TM9SF1O15321 606 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 ZWINTO95229 277 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 ZNF888P0CJ79 500 aaPredicted RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 F8A1P23610 371 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 RAB8AP61006 207 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 SNCBQ16143 134 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 HIST2H2ACQ16777 129 aaPredicted RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 SGO1Q5FBB7 561 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 CES4AQ5XG92 561 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 HIST2H2AA3Q6FI13 130 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 GPRIN3Q6ZVF9 776 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 PIGWQ7Z7B1 504 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 HUS1BQ8NHY5 278 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 ZNF382Q96SR6 550 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 DRC3Q9H069 523 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 MID1IP1Q9NPA3 183 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 SLC22A11Q9NSA0 550 aa17.43■□□□□ 0.38
SDF4-201ENST00000263741 FARSBQ9NSD9 589 aaKnown RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 MRPS18BQ9Y676 258 aaKnown RBP17.43■□□□□ 0.38
SDF4-201ENST00000263741 NUP210LQ5VU65 1888 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 FOXS1O43638 330 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 KLK3P07288 261 aaPredicted RBP17.42■□□□□ 0.38
SDF4-201ENST00000263741 HBQ1P09105 142 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 LIFP15018 202 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 WT1P19544 449 aaPredicted RBP17.42■□□□□ 0.38
SDF4-201ENST00000263741 ITPKBP27987 946 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 ARRB2P32121 409 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 ARSFP54793 590 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 WDR4P57081 412 aaKnown RBP17.42■□□□□ 0.38
SDF4-201ENST00000263741 RGS1Q08116 209 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 SYT16Q17RD7 645 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 FAM214AQ32MH5 1076 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 FAM198BQ6UWH4 519 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 PDSS2Q86YH6 399 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 LAS2Q8IYD9 372 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 TRPV3Q8NET8 790 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 NT5CQ8TCD5 201 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 AGAP11Q8TF27 550 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 SLC6A16Q9GZN6 736 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 NT5DC2Q9H857 520 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 ENAMQ9NRM1 1142 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 PADI1Q9ULC6 663 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 PKD1L2Q7Z442 2459 aa17.42■□□□□ 0.38
SDF4-201ENST00000263741 SAP18O00422 153 aaKnown RBP17.41■□□□□ 0.38
SDF4-201ENST00000263741 UGDHO60701 494 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 TGFB1P01137 390 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 CHRNGP07510 517 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 CCNYL3P0C7X3 344 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 DHRS4L1P0CG22 281 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 DLSTP36957 453 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 FOXA1P55317 472 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 RPS18P62269 152 aaKnown RBP17.41■□□□□ 0.38
SDF4-201ENST00000263741 MAT1AQ00266 395 aaKnown RBP17.41■□□□□ 0.38
SDF4-201ENST00000263741 ABHD18Q0P651 414 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms