RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RAB8AP61006 207 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 PHEXP78562 749 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 NHLH1Q02575 133 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 EMX2Q04743 252 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ZNF33BQ06732 778 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ACSM2AQ08AH3 577 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 SQSTM1Q13501 440 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 WASHC2DQ5SRD0 308 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ACSM2BQ68CK6 577 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 OGFOD2Q6N063 350 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 NOXRED1Q6NXP6 359 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 PAOXQ6QHF9 649 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 C6orf89Q6UWU4 347 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 TRPM8Q7Z2W7 1104 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 COMMD6Q7Z4G1 85 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 CLNKQ7Z7G1 428 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 SHISA5Q8N114 240 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 METTL4Q8N3J2 472 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 TRPV3Q8NET8 790 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 TTLQ8NG68 377 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 OR9I1Q8NGQ6 314 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ZCCHC10Q8TBK6 192 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 GFM2Q969S9 779 aaKnown RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 MS4A6EQ96DS6 147 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 TCTN2Q96GX1 697 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 CCDC74BQ96LY2 380 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 LRRC37BQ96QE4 947 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 CD180Q99467 661 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 SERPINI1Q99574 410 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 C17orf62Q9BQA9 187 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 CCDC106Q9BWC9 280 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ZNF717Q9BY31 904 aaPredicted RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 REXO4Q9GZR2 422 aaKnown RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 SPRTNQ9H040 489 aaPredicted RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 PDE7BQ9NP56 450 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ADGRE2Q9UHX3 823 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 HCN4Q9Y3Q4 1203 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 GPR45Q9Y5Y3 372 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 COL27A1Q8IZC6 1860 aaPredicted RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 CCT8L1PA6NM43 557 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 ERI3O43414 337 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 DNAJB6O75190 326 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 LRATO95237 230 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 MED26O95402 600 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF888P0CJ79 500 aaPredicted RBP9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 THRAP10827 490 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 BCKDHAP12694 445 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 NELFEP18615 380 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 SDC1P18827 310 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 GPX3P22352 226 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 BSGP35613 385 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 ARL4DP49703 201 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 RAP1GDS1P52306 607 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 UFM1P61960 85 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 HSD11B2P80365 405 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 KLF10Q13118 480 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 CUL3Q13618 768 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 SPIDRQ14159 915 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 PTGR1Q14914 329 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 PHF19Q5T6S3 580 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 PRAMEF17Q5VTA0 474 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 METTL21CQ5VZV1 264 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 CYP20A1Q6UW02 462 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 PRSS41Q7RTY9 318 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 PRSS42Q7Z5A4 293 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 ARHGAP22Q7Z5H3 698 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 SPATA19Q7Z5L4 167 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 PIP4P1Q86T03 277 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 KRTCAP2Q8N6L1 136 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 CSNK1A1LQ8N752 337 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 POU5F2Q8N7G0 328 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 DEFB124Q8NES8 71 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 OR4D9Q8NGE8 314 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 CDC26Q8NHZ8 85 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 STON2Q8WXE9 905 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 KLHL6Q8WZ60 621 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 RERGQ96A58 199 aaPredicted RBP9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 RGMAQ96B86 450 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 C11orf24Q96F05 449 aaPredicted RBP9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC41A2Q96JW4 573 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 TSSK3Q96PN8 268 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 TEFMQ96QE5 360 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC6A16Q9GZN6 736 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 ACTL8Q9H568 366 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 ARL8BQ9NVJ2 186 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 AIG1Q9NVV5 245 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 SEMA5BQ9P283 1151 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 TRIM33Q9UPN9 1127 aa9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 RUVBL1Q9Y265 456 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-201ENST00000263694 SEC16AO15027 2179 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 LOC100653049A0A140TA62 436 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 GNG14A0A1W2PPG7 69 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 ERICH4A6NGS2 130 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 TMEM150CB9EJG8 249 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 D6RAR5 112 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 NPIPB8E9PQR5 432 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 AKAP10O43572 662 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 HYAL3O43820 417 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms