RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 ZSCAN9O15535 394 aaPredicted RBP23.19■■□□□ 1.3
SCN1B-201ENST00000262631 B3GALT4O96024 378 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 HSD3B1P14060 373 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 HSD3B2P26439 372 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 EPHA3P29320 983 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 IMPG1Q17R60 797 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 C10orf90Q96M02 699 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 EBF4Q9BQW3 602 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 TRIM55Q9BYV6 548 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 KCNK13Q9HB14 408 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 PSD3Q9NYI0 1048 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 AKAP7Q9P0M2 348 aaPredicted RBP23.19■■□□□ 1.3
SCN1B-201ENST00000262631 VPS29Q9UBQ0 182 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 SPTBP11277 2137 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 CCDC187A0A096LP49 1063 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 LSM1O15116 133 aaKnown RBP23.19■■□□□ 1.3
SCN1B-201ENST00000262631 PLA2G16P53816 162 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 RAB8AP61006 207 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 TBL3Q12788 808 aaKnown RBP23.19■■□□□ 1.3
SCN1B-201ENST00000262631 CUL3Q13618 768 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 TUBB8Q3ZCM7 444 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 EPGNQ6UW88 154 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 CHSY3Q70JA7 882 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 CACTIN-AS1Q8N1I8 211 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 SERPINI1Q99574 410 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 CCT7Q99832 543 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 SORBS1Q9BX66 1292 aaKnown RBP23.19■■□□□ 1.3
SCN1B-201ENST00000262631 FBXO8Q9NRD0 319 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 RARRES3Q9UL19 164 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 A0A0G2JN53 185 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 GOLGA8QA0A0J9YX86 632 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 GOLGA8OA6NCC3 632 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 B4E171 279 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 GOLGA8NF8WBI6 632 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 SLC28A1O00337 649 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 RTCAO00442 366 aaKnown RBP23.18■■□□□ 1.3
SCN1B-201ENST00000262631 PLPP1O14494 284 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 ZNF888P0CJ79 500 aaPredicted RBP23.18■■□□□ 1.3
SCN1B-201ENST00000262631 TSPAN7P41732 249 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 IDH3AP50213 366 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 STXBP1P61764 594 aaKnown RBP23.18■■□□□ 1.3
SCN1B-201ENST00000262631 IL11RAQ14626 422 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 NR6A1Q15406 480 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 MANEAQ5SRI9 462 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 PWWP2BQ6NUJ5 590 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 PRSS41Q7RTY9 318 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 GPR135Q8IZ08 494 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 UTP15Q8TED0 518 aaKnown RBP23.18■■□□□ 1.3
SCN1B-201ENST00000262631 TUBGCP3Q96CW5 907 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 APIPQ96GX9 242 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 C17orf62Q9BQA9 187 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 NLNQ9BYT8 704 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 EPN3Q9H201 632 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 AKTIPQ9H8T0 292 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 LHX9Q9NQ69 397 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 SLC39A1Q9NY26 324 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 PISDQ9UG56 409 aa23.18■■□□□ 1.3
SCN1B-201ENST00000262631 HYKKA2RU49 373 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 TRPC5OSA6NMA1 111 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 PLD2O14939 933 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 POLR1CO15160 346 aaPredicted RBP23.17■■□□□ 1.3
SCN1B-201ENST00000262631 ERI3O43414 337 aaKnown RBP23.17■■□□□ 1.3
SCN1B-201ENST00000262631 RGS14O43566 566 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 DIAPH2O60879 1101 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 PEX11AO75192 247 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 FGF5P12034 268 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 GCGRP47871 477 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 GRM7Q14831 915 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 C3orf38Q5JPI3 329 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 SPDYAQ5MJ70 313 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 FOXR1Q6PIV2 292 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 TMPRSS7Q7RTY8 843 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 OR2L5Q8NG80 312 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 MAELQ96JY0 434 aaKnown RBP23.17■■□□□ 1.3
SCN1B-201ENST00000262631 OR52B2Q96RD2 323 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 ZNF717Q9BY31 904 aaPredicted RBP23.17■■□□□ 1.3
SCN1B-201ENST00000262631 SATB2Q9UPW6 733 aa23.17■■□□□ 1.3
SCN1B-201ENST00000262631 A0A0G2JND7 137 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 TXNDC9O14530 226 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 ZNF749O43361 778 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 RSL1D1O76021 490 aaKnown RBP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 TROVE2P10155 538 aaKnown RBP eCLIP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 MAPK10P53779 464 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 GALNTL6Q49A17 601 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 TMEM35AQ53FP2 167 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 ABHD17CQ6PCB6 329 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 PPP1R3BQ86XI6 285 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 HOMEZQ8IX15 550 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 JMJD7P0C870 316 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 SMIM10L1P0DMW3 83 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 EIF3IQ13347 325 aaKnown RBP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 RFTN2Q52LD8 501 aaPredicted RBP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 TLDC1Q6P9B6 456 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 ZNF793Q6ZN11 406 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 LARP4Q71RC2 724 aaKnown RBP eCLIP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 CPLX4Q7Z7G2 160 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 PDSS2Q86YH6 399 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 GALNT15Q8N3T1 639 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 C1orf52Q8N6N3 182 aaKnown RBP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 AMER3Q8N944 861 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms